RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ACOT9Q9Y305 439 aa14.06□□□□□ -0.16
RAB5C-205ENST00000550013 C2orf72A6NCS6 295 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 CLCA1A8K7I4 914 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 RAD51CO43502 376 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 UGDHO60701 494 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 SIX3O95343 332 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-205ENST00000550013 TMIGD3P0DMS9 266 aaPredicted RBP14.05□□□□□ -0.16
RAB5C-205ENST00000550013 NT5EP21589 574 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 GPX3P22352 226 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 OPRM1P35372 400 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 XKP51811 444 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 ALDH18A1P54886 795 aaKnown RBP14.05□□□□□ -0.16
RAB5C-205ENST00000550013 SORDQ00796 357 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 FOXF2Q12947 444 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 PLXDC2Q6UX71 529 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 CCDC25Q86WR0 208 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 L3MBTL4Q8NA19 623 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 RHEBL1Q8TAI7 183 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 CDK15Q96Q40 435 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 METTL7AQ9H8H3 244 aa14.05□□□□□ -0.16
RAB5C-205ENST00000550013 CPSF2Q9P2I0 782 aaKnown RBP14.05□□□□□ -0.16
RAB5C-205ENST00000550013 A0A1W2PPR1 153 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 FOXE1O00358 373 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 PPM1BO75688 479 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 IL18BPO95998 194 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 C2P06681 752 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 ABCB1P08183 1280 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 CPMP14384 443 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 KRT15P19012 456 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 S1PR1P21453 382 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 HOXC12P31275 282 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 MAGEA4P43358 317 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 DCAF7P61962 342 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 RPP38P78345 283 aaKnown RBP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 LTBQ06643 244 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 RCAN2Q14206 197 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 PCBP2Q15366 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 FAM83EQ2M2I3 478 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 MROH9Q5TGP6 573 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 BIVMQ86UB2 503 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 KRTAP1-3Q8IUG1 177 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 OR7G1Q8NGA0 311 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 OR4K14Q8NGD5 310 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 OR1J4Q8NGS1 313 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 SLC44A1Q8WWI5 657 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 MRRFQ96E11 262 aaKnown RBP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 NODALQ96S42 347 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 TUBA1CQ9BQE3 449 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 YIPF4Q9BSR8 244 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 RBM24Q9BX46 236 aaKnown RBP14.04□□□□□ -0.16
RAB5C-205ENST00000550013 GALNT9Q9HCQ5 603 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 SERHLQ9NQF3 203 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
RAB5C-205ENST00000550013 A0A087X1B8 175 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 HMX2A2RU54 273 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 OR7A17O14581 309 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
RAB5C-205ENST00000550013 SEMA3DO95025 777 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 HRGP04196 525 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 KLK1P06870 262 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 CYP4B1P13584 511 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 CD53P19397 219 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 CNTFP26441 200 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 STX2P32856 288 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 PTGDSP41222 190 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 PLTPP55058 493 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 EXOSC7Q15024 291 aaKnown RBP14.03□□□□□ -0.16
RAB5C-205ENST00000550013 TRADDQ15628 312 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 C6orf163Q5TEZ5 329 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 FAM111BQ6SJ93 734 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 LUZP2Q86TE4 346 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 SIMC1Q8NDZ2 872 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 C17orf47Q8NEP4 570 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 OR52B6Q8NGF0 335 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 ZPLD1Q8TCW7 415 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 HGDQ93099 445 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 GPR78Q96P69 363 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 ITPAQ9BY32 194 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 MRPL1Q9BYD6 325 aaKnown RBP14.03□□□□□ -0.16
RAB5C-205ENST00000550013 NOL11Q9H8H0 719 aaKnown RBP14.03□□□□□ -0.16
RAB5C-205ENST00000550013 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 EHD3Q9NZN3 535 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 RNF14Q9UBS8 474 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 FETUBQ9UGM5 382 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
RAB5C-205ENST00000550013 FN1P02751 2386 aaKnown RBP14.03□□□□□ -0.16
RAB5C-205ENST00000550013 ARID1AO14497 2285 aa14.02□□□□□ -0.16
RAB5C-205ENST00000550013 H0Y3Z8 333 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 SNPHO15079 494 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 ICOSLGO75144 302 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 KLHL2O95198 593 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 CLDN9O95484 217 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 ACTL6AO96019 429 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 CPN1P15169 458 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 PORP16435 677 aaPredicted RBP14.02□□□□□ -0.17
RAB5C-205ENST00000550013 ARL1P40616 181 aaPredicted RBP14.02□□□□□ -0.17
RAB5C-205ENST00000550013 SRYQ05066 204 aa14.02□□□□□ -0.17
RAB5C-205ENST00000550013 C2orf54Q08AI8 447 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms