RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ACBD3Q9H3P7 528 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 IPPKQ9H8X2 491 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 AHSPQ9NZD4 102 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 JKAMPQ9P055 326 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 MED12LQ86YW9 2145 aa12.4□□□□□ -0.43
TROAP-211ENST00000549891 GNB5O14775 395 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 PGRMC2O15173 223 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 NT5EP21589 574 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 ABCD3P28288 659 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 PTPN6P29350 595 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 GMPRP36959 345 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 ARL1P40616 181 aaPredicted RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 AGFG1P52594 562 aaKnown RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 GPX6P59796 221 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 DCAF7P61962 342 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 CAV1Q03135 178 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 SNTA1Q13424 505 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 GTF2H2Q13888 395 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 ACAP2Q15057 778 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 PCBP2Q15366 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
TROAP-211ENST00000549891 EIPR1Q53HC9 387 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 C10orf62Q5T681 223 aaPredicted RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 SLC30A6Q6NXT4 461 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 GTF2H2CQ6P1K8 395 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 TMEM81Q6P7N7 255 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 PAGE2Q7Z2X7 111 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 GOLGA7Q7Z5G4 137 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 L3MBTL4Q8NA19 623 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 FAM83FQ8NEG4 500 aaPredicted RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 ISL2Q96A47 359 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 C18orf12Q96KH6 178 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 DACH2Q96NX9 599 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 TM9SF2Q99805 663 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 SFXN3Q9BWM7 321 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 RBM24Q9BX46 236 aaKnown RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
TROAP-211ENST00000549891 BEX4Q9NWD9 120 aaPredicted RBP12.39□□□□□ -0.43
TROAP-211ENST00000549891 GOLGA6L10A6NI86 522 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 FAM171A2A8MVW0 826 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 CASKO14936 926 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 GUCY1B2O75343 617 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 PPM1BO75688 479 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 CLDN9O95484 217 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 GBAP04062 536 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ABCB1P08183 1280 aaPredicted RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 CT62P0C5K7 136 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 CPMP14384 443 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 CPN1P15169 458 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 PORP16435 677 aaPredicted RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 GPX3P22352 226 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ADSLP30566 484 aaPredicted RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 CPA2P48052 419 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 XKP51811 444 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 NAGLUP54802 743 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 EEF1A1P68104 462 aaKnown RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 EEF1A1P5Q5VTE0 462 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 SHEQ5VZ18 495 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ENPP6Q6UWR7 440 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ANGPTL8Q6UXH0 198 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 NUP54Q7Z3B4 507 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 PRR22Q8IZ63 422 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 CENPLQ8N0S6 344 aaPredicted RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 VWA5B2Q8N398 1253 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 C9orf106Q8NAJ2 232 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 WFDC11Q8NEX6 87 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 FBF1Q8TES7 1133 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 KCTD4Q8WVF5 259 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ATP6V1E2Q96A05 226 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 OSBPL11Q9BXB4 747 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 ADAM29Q9UKF5 820 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 UTP11Q9Y3A2 253 aaKnown RBP12.38□□□□□ -0.43
TROAP-211ENST00000549891 RNF11Q9Y3C5 154 aa12.38□□□□□ -0.43
TROAP-211ENST00000549891 MED12Q93074 2177 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 H0Y3Z8 333 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 SNPHO15079 494 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 ACOX3O15254 700 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 CBR3O75828 277 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 KLHL2O95198 593 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 RCBTB2O95199 551 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 HRGP04196 525 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 C2P06681 752 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 INHBBP09529 407 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 HOXC12P31275 282 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
TROAP-211ENST00000549891 NEK2P51955 445 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 CCNG1P51959 295 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 DIO3P55073 304 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 LTBQ06643 244 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 GAB1Q13480 694 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 DCST1Q5T197 706 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 CCNYL2Q5T2Q4 361 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
TROAP-211ENST00000549891 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
TROAP-211ENST00000549891 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 TRPC4APQ8TEL6 797 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 SMPDL3BQ92485 455 aa12.37□□□□□ -0.43
TROAP-211ENST00000549891 UCN3Q969E3 161 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms