RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC47A1Q96FL8 570 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 VSTM2LQ96N03 204 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SLC39A3Q9BRY0 314 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CCM2Q9BSQ5 444 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ERVK-6Q9BXR3 956 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CSTL1Q9H114 145 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CALHM2Q9HA72 323 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CRLF2Q9HC73 371 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 POLD4Q9HCU8 107 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 APMAPQ9HDC9 416 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 FAM114A2Q9NRY5 505 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 GLRX2Q9NS18 164 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 MIOXQ9UGB7 285 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 FBXL4Q9UKA2 621 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 RALYQ9UKM9 306 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 RIPK3Q9Y572 518 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SLCO1B1Q9Y6L6 691 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ATP10BO94823 1461 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SCAF11Q99590 1463 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SHANK3Q9BYB0 1731 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CNTLNQ9NXG0 1405 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 AHDC1Q5TGY3 1603 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 UNC13BO14795 1591 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 TIAM1Q13009 1591 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZMYM6O95789 1325 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 WDR19Q8NEZ3 1342 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 TRBV5-5A0A0J9YX44 114 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FAM240BA0A1B0GVZ2 78 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 HELTA6NFD8 242 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF716A6NP11 495 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 WASH3PC4AMC7 463 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 NPIPA2E9PIF3 369 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CCSO14618 274 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 EPHB6O15197 1021 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 B4GAT1O43505 415 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 SYNGR3O43761 229 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 JAK2O60674 1132 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 TM7SF2O76062 418 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 BAG4O95429 457 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 LYNP07948 512 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF735P0CB33 412 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 MBL2P11226 248 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CDH1P12830 882 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 HLA-DOBP13765 273 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CCDC130P13994 396 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF44P15621 663 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 GPX3P22352 226 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CCR1P32246 355 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 PPT1P50897 306 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 B3GALT5-AS1P59052 145 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 RPL23AP62750 156 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 PPIAP62937 165 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FGL1Q08830 312 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 DRP2Q13474 957 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 EXOSC2Q13868 293 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 P2RY14Q15391 338 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 SSX2Q16385 188 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CLPPQ16740 277 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF528Q3MIS6 628 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 SIRPB2Q5JXA9 342 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CAPN13Q6MZZ7 669 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 WASH2PQ6VEQ5 465 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF771Q7L3S4 317 aaPredicted RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FCRLAQ7L513 359 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FAM228AQ86W67 206 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 C17orf64Q86WR6 236 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 EFCAB13Q8IY85 973 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 ZNF683Q8IZ20 524 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 MAPKAPK5-AS1Q8N8E1 139 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FAM184AQ8NB25 1140 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 SLC37A3Q8NCC5 494 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 DDHD1Q8NEL9 900 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 OR6C4Q8NGE1 309 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 OR52J3Q8NH60 311 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 WDR36Q8NI36 951 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 RDH11Q8TC12 318 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 TMED6Q8WW62 240 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 NT5C3BQ969T7 300 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 NXPE2Q96DL1 559 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 PIWIL1Q96J94 861 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 C17orf77Q96MU5 243 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 RBM24Q9BX46 236 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 NLNQ9BYT8 704 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 GPR61Q9BZJ8 451 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 LRRCC1Q9C099 1032 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 CPVLQ9H3G5 476 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 KAT8Q9H7Z6 458 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FN3KRPQ9HA64 309 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 PELI2Q9HAT8 420 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 C3orf14Q9HBI5 128 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 GDF3Q9NR23 364 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 OCIAD1Q9NX40 245 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 TECRQ9NZ01 308 aaKnown RBP3.77□□□□□ -1.81
SCAF11-210ENST00000547654 PCSK1NQ9UHG2 260 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 LRRC9Q6ZRR7 1453 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 RTEL1-TNFRSF6BF6WH68 1400 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 FGD6Q6ZV73 1430 aa3.77□□□□□ -1.81
SCAF11-210ENST00000547654 A0A075B6Q4 140 aa3.76□□□□□ -1.81
SCAF11-210ENST00000547654 LOC105371242A0A075B767 164 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms