RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 LTB4RQ15722 352 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 NNATQ16517 81 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 TRMT12Q53H54 448 aaKnown RBP12.22□□□□□ -0.45
CPSF6-204ENST00000547486 TBCELQ5QJ74 424 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF678Q5SXM1 525 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 ULK2Q8IYT8 1036 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 CDYL2Q8N8U2 506 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 C17orf47Q8NEP4 570 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 CTHRC1Q96CG8 243 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 CNRIP1Q96F85 164 aaPredicted RBP12.22□□□□□ -0.45
CPSF6-204ENST00000547486 BRINP2Q9C0B6 783 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 MAT2BQ9NZL9 334 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 HEY2Q9UBP5 337 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 VPS29Q9UBQ0 182 aa12.22□□□□□ -0.45
CPSF6-204ENST00000547486 C2orf72A6NCS6 295 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 GOLGA6L10A6NI86 522 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 GUCY1B2O75343 617 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 SUPT7LO94864 414 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 SNX4O95219 450 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 CBX7O95931 251 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 ATP1B1P05026 303 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 HPNP05981 417 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 FAM153BP0C7A2 387 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 IMPDH1P20839 514 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 CDK9P50750 372 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 WNT3P56703 355 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 NRG3P56975 720 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 RAE1P78406 368 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 CRYZQ08257 329 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 FAM153CQ494X1 144 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 VWA5B2Q8N398 1253 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 LIX1Q8N485 282 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 NAXEQ8NCW5 288 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 HGDQ93099 445 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 KLHL29Q96CT2 875 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 ZNF597Q96LX8 424 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 NODALQ96S42 347 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 SECISBP2Q96T21 854 aaKnown RBP12.21□□□□□ -0.45
CPSF6-204ENST00000547486 ITPAQ9BY32 194 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 B4GALT7Q9UBV7 327 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 BCAP29Q9UHQ4 241 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 C15orf41Q9Y2V0 281 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 PLLPQ9Y342 182 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 SLC6A5Q9Y345 797 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 PCDHGB3Q9Y5G1 929 aa12.21□□□□□ -0.45
CPSF6-204ENST00000547486 CELSR1Q9NYQ6 3014 aa12.21□□□□□ -0.46
CPSF6-204ENST00000547486 HCFC1P51610 2035 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 NCKAP5O14513 1909 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 C15orf38-AP3S2A0A0A6YYH1 394 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 FOXO6A8MYZ6 492 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 GNB5O14775 395 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 RIPK2O43353 540 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 NME6O75414 186 aaPredicted RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 ABHD2P08910 425 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 PCSK2P16519 638 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TAC1P20366 129 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 PTGDSP41222 190 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 ALDH9A1P49189 494 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 EMDP50402 254 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 HTR6P50406 440 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TRA2BP62995 288 aaKnown RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 EIPR1Q53HC9 387 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 RIPPLY2Q5TAB7 128 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 LGSNQ5TDP6 509 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 VASNQ6EMK4 673 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 POMZP3Q6PJE2 187 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TRMT10CQ7L0Y3 403 aaKnown RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 CDH24Q86UP0 819 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 PACS2Q86VP3 889 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 CCDC116Q8IYX3 515 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 OR52R1Q8NGF1 315 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 MTBPQ96DY7 904 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF382Q96SR6 550 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 ZNF559Q9BR84 538 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TXLNGYQ9BZA5 131 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 ACPTQ9BZG2 426 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 EPB41L4BQ9H329 900 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 KCNN3Q9UGI6 736 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 PSME2Q9UL46 239 aa12.2□□□□□ -0.46
CPSF6-204ENST00000547486 TEP1Q99973 2627 aaKnown RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 PHF3Q92576 2039 aaKnown RBP12.2□□□□□ -0.46
CPSF6-204ENST00000547486 NINQ8N4C6 2090 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 AHRRA9YTQ3 701 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 UGT2B11O75310 529 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 ULK1O75385 1050 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 PPM1BO75688 479 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 EPPINO95925 133 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 IL3P08700 152 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 NAGAP17050 411 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 BMP7P18075 431 aa12.19□□□□□ -0.46
CPSF6-204ENST00000547486 DRD5P21918 477 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms