RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TPBGQ13641 420 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 SYPL1Q16563 259 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 MINDY4Q4G0A6 757 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 CCDC92Q53HC0 331 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-223ENST00000544669 DDI2Q5TDH0 399 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 MRM1Q6IN84 353 aaKnown RBP12.3□□□□□ -0.44
CPSF7-223ENST00000544669 METAP1DQ6UB28 335 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-223ENST00000544669 UBE3DQ7Z6J8 389 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 PHC2Q8IXK0 858 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 PLA2G15Q8NCC3 412 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 OR2A1Q8NGT9 310 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 PIGXQ8TBF5 258 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 UFD1Q92890 307 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 SLC25A46Q96AG3 418 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 SLC22A18Q96BI1 424 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
CPSF7-223ENST00000544669 LRR1Q96L50 414 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 AGAP4Q96P64 663 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-223ENST00000544669 NLGN3Q9NZ94 848 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 DNAJC27Q9NZQ0 273 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 ZNF232Q9UNY5 417 aa12.3□□□□□ -0.44
CPSF7-223ENST00000544669 HTR3EA5X5Y0 456 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 IGLON5A6NGN9 336 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SOX30O94993 753 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 ALPPP05187 535 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SERPIND1P05546 499 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 MMP11P24347 488 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 FGF9P31371 208 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 CAPZA2P47755 286 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 METAP1P53582 386 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 RPS21P63220 83 aaKnown RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 FPGSQ05932 587 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SELENBP1Q13228 472 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 PIN1Q13526 163 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 CEBPEQ15744 281 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 LEXMQ3ZCV2 418 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 GPAT3Q53EU6 434 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SYT14P1Q58G82 188 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 FAM78AQ5JUQ0 283 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SLC48A1Q6P1K1 146 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 ABHD17CQ6PCB6 329 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 SZRD1Q7Z422 152 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 ZER1Q7Z7L7 766 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 MMP21Q8N119 569 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 OR8H2Q8N162 312 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 C2orf73Q8N5S3 287 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 PMM1Q92871 262 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 ZNF582Q96NG8 517 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 CTRCQ99895 268 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 C17orf62Q9BQA9 187 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 TMEM121BQ9BXQ6 578 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 RSPH9Q9H1X1 276 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-223ENST00000544669 FBRSQ9HAH7 460 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 POLE4Q9NR33 117 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 INIPQ9NRY2 104 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
CPSF7-223ENST00000544669 URADA6NGE7 173 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 AP3D1O14617 1153 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 CYP7B1O75881 506 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 SOX14O95416 240 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ZNF10P21506 573 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 S100A1P23297 94 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ATP5A1P25705 553 aaKnown RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 RPS19P39019 145 aaKnown RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 BUD31P41223 144 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 MAGEA10P43363 369 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 PSPHP78330 225 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ACSM1Q08AH1 577 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 DSG2Q14126 1118 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 CST6Q15828 149 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 DECR1Q16698 335 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ZNF311Q5JNZ3 666 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 GDPD3Q7L5L3 318 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 IQCHQ86VS3 1027 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 RAB43Q86YS6 212 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ACOT4Q8N9L9 421 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 FAM181AQ8N9Y4 354 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 MFSD9Q8NBP5 474 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 MORN4Q8NDC4 146 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 OR52I1Q8NGK6 324 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 MS4A6EQ96DS6 147 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 MSLNLQ96KJ4 702 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 INSM2Q96T92 566 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ARHGDIGQ99819 225 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 BTBD1Q9H0C5 482 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 PRKAB1Q9Y478 270 aa12.28□□□□□ -0.44
CPSF7-223ENST00000544669 ASB4Q9Y574 426 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms