RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 FTSJ1Q9UET6 329 aa15.36■□□□□ 0.05
COL4A1-204ENST00000543140 A4GNTQ9UNA3 340 aa15.36■□□□□ 0.05
COL4A1-204ENST00000543140 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 UGT2B17O75795 530 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 STSP08842 583 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 CPN2P22792 545 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 LSSP48449 732 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 VBP1P61758 197 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 YPEL5P62699 121 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 LSM11P83369 360 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 SYT16Q17RD7 645 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 KLHL6Q8WZ60 621 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 TOE1Q96GM8 510 aaKnown RBP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 PLGRKTQ9HBL7 147 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 CPNE7Q9UBL6 633 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 MRPS2Q9Y399 296 aaKnown RBP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 CDC42P60953 191 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 ID2Q02363 134 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 TARDBPQ13148 414 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 RUNX2Q13950 521 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 ANKDD1AQ495B1 522 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 PTCHD4Q6ZW05 846 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 P2RY8Q86VZ1 359 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 BBS10Q8TAM1 723 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 NT5CQ8TCD5 201 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 RPL3LQ92901 407 aaKnown RBP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 MYDGFQ969H8 173 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 DTNBP1Q96EV8 351 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 IL4I1Q96RQ9 567 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 UCK2Q9BZX2 261 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 EVA1BQ9NVM1 165 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 DNAAF2Q9NVR5 837 aaKnown RBP15.35■□□□□ 0.05
COL4A1-204ENST00000543140 C2orf42Q9NWW7 574 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 SLCO1B1Q9Y6L6 691 aa15.35■□□□□ 0.05
COL4A1-204ENST00000543140 ARRDC5A6NEK1 342 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ZAR1LA6NP61 321 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 H3BN98 237 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 FRS3O43559 492 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 GABARAPO95166 117 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 TNFP01375 233 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ANXA11P50995 505 aaKnown RBP15.34■□□□□ 0.05
COL4A1-204ENST00000543140 XKP51811 444 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 PPP1CAP62136 330 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 CHRNEQ04844 493 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 C1orf61Q13536 156 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 FAM111BQ6SJ93 734 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 PRSS41Q7RTY9 318 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 TM4SF19Q96DZ7 209 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 HSPBAP1Q96EW2 488 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 C10orf90Q96M02 699 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 FNDC11Q9BVV2 318 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ARMC7Q9H6L4 198 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 BCL2L10Q9HD36 194 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 PLCXD1Q9NUJ7 323 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 KCMF1Q9P0J7 381 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 REV1Q9UBZ9 1251 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 SLC9A8Q9Y2E8 581 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 FAAHO00519 579 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 CLPXO76031 633 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ADAP00813 363 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 CDK1P06493 297 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 TGFBR1P36897 503 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 BMXP51813 675 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 TNFRSF17Q02223 184 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ST3GAL4Q11206 333 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 SUZ12Q15022 739 aaKnown RBP15.34■□□□□ 0.05
COL4A1-204ENST00000543140 PGBD2Q6P3X8 592 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 PODNL1Q6PEZ8 512 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 TDHQ8IZJ6 230 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 OR7G2Q8NG99 324 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 DHRS1Q96LJ7 313 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 GPR174Q9BXC1 333 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 HRASLS2Q9NWW9 162 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 ACAD8Q9UKU7 415 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 HS3ST3A1Q9Y663 406 aa15.34■□□□□ 0.05
COL4A1-204ENST00000543140 SH3PXD2BA1X283 911 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 PRAMEF26H0Y7S4 382 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 TOR1BO14657 336 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 TNFSF14O43557 240 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 CD36P16671 472 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 RABIFP47224 123 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 NCS1P62166 190 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 FBXO43Q4G163 708 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ZNF438Q7Z4V0 828 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 TAF8Q7Z7C8 310 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 MEX3DQ86XN8 651 aaKnown RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 VRK2Q86Y07 508 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 STX19Q8N4C7 294 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 FAM160A2Q8N612 972 aaPredicted RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 B3GNT7Q8NFL0 401 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 RLN3Q8WXF3 142 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 MOAP1Q96BY2 351 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 SPATA5L1Q9BVQ7 753 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 POLR2J3Q9H1A7 115 aaKnown RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 TAS2R16Q9NYV7 291 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ENOPH1Q9UHY7 261 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 PILRAQ9UKJ1 303 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms