RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 YJEFN3A6XGL0 299 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 TMCO5BA8MYB1 307 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ERVV-1B6SEH8 477 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CCSO14618 274 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 KRT33AO76009 404 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 MFN2O95140 757 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 PRSS1P07477 247 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 SP1P08047 785 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 GSTA1P08263 222 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 THRBP10828 461 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 TNNT2P45379 298 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-217ENST00000541578 HNMTP50135 292 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CCL11P51671 97 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 NAPAP54920 295 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CDKL1Q00532 357 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 SLC39A6Q13433 755 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 GPR50Q13585 617 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF74Q16587 644 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 DUSP5Q16690 384 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 USH1GQ495M9 461 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 GTDC1Q4AE62 458 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ATP1A1-AS1Q5TC04 95 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ARHGAP17Q68EM7 881 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CDC42EP5Q6NZY7 148 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF790Q6PG37 636 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 FAM159AQ6UWV7 190 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 FOXL2NBQ6ZUU3 175 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 SH2D5Q6ZV89 423 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 Q71RC1 249 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CHMP1BQ7LBR1 199 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 TMEM110Q86TL2 294 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 YRDCQ86U90 279 aaKnown RBP3.72□□□□□ -1.81
SNHG1-217ENST00000541578 NFE4Q86UQ8 179 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 TEX26Q8N6G2 289 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 STPG4Q8N801 248 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 BCORP1Q8N888 145 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 MLKLQ8NB16 471 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 OR4D10Q8NGI6 311 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 OR4L1Q8NH43 312 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 DQX1Q8TE96 717 aaKnown RBP3.72□□□□□ -1.81
SNHG1-217ENST00000541578 SLC35C1Q96A29 364 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 KRT12Q99456 494 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CCM2Q9BSQ5 444 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 CCSER1Q9C0I3 900 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 SHARPINQ9H0F6 387 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 NT5C3AQ9H0P0 336 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 EGLN3Q9H6Z9 239 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 ZNF624Q9P2J8 865 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-217ENST00000541578 OR1A2Q9Y585 309 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 NPC1L1Q9UHC9 1359 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 NUP98P52948 1817 aa3.72□□□□□ -1.81
SNHG1-217ENST00000541578 UMODL1Q5DID0 1318 aa3.71□□□□□ -1.81
SNHG1-217ENST00000541578 CEP290O15078 2479 aa3.71□□□□□ -1.81
SNHG1-217ENST00000541578 BCORQ6W2J9 1755 aa3.71□□□□□ -1.81
SNHG1-217ENST00000541578 A0A087WUV0 522 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 IGHV4-61A0A0C4DH41 118 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 ATP6AP2A0A1C7CYW4 349 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 RIPK2O43353 540 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 TLX2O43763 284 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 RHOBTB1O94844 696 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 GAS8-AS1O95177 125 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 IGHV4-59P01825 116 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 CRYAAP02489 173 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 FUT1P19526 365 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 HNRNPA2B1P22626 353 aaKnown RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 GIFP27352 417 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 PRDX2P32119 198 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 SSR1P43307 286 aaKnown RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 PRMT2P55345 433 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 HSPA14Q0VDF9 509 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 DRP2Q13474 957 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 EXOSC7Q15024 291 aaKnown RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 AGKQ53H12 422 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 TMEM41BQ5BJD5 291 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 XKR6Q5GH73 641 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 CFAP157Q5JU67 520 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 C1orf189Q5VU69 101 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 SULT1C3Q6IMI6 304 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 CEACAM20Q6UY09 585 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 ASRGL1Q7L266 308 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 PIGZQ86VD9 579 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 ZC3H3Q8IXZ2 948 aaKnown RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 MARVELD2Q8N4S9 558 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 RAB42Q8N4Z0 105 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 BANPQ8N9N5 519 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 WBP2Q969T9 261 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 OMA1Q96E52 524 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 DTNBP1Q96EV8 351 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 TTC25Q96NG3 672 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 UHRF2Q96PU4 802 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 TESK2Q96S53 571 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 GPA33Q99795 319 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 CBWD1Q9BRT8 395 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 ERP44Q9BS26 406 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 GDF3Q9NR23 364 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 INTS9Q9NV88 658 aaKnown RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 MED17Q9NVC6 651 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 TEX10Q9NXF1 929 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 COX16Q9P0S2 106 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms