RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 GSG1Q2KHT4 349 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 MINDY4Q4G0A6 757 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM255AQ5JRV8 349 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 KRBOX4Q5JUW0 171 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 OTUD1Q5VV17 481 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF660Q6AZW8 331 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 METAP1DQ6UB28 335 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 LRRN1Q6UXK5 716 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 FAM122BQ7Z309 247 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 FGD2Q7Z6J4 655 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 TRIM69Q86WT6 500 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 ZDHHC21Q8IVQ6 265 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 LRRC18Q8N456 261 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CCDC54Q8NEL0 328 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 OR10A6Q8NH74 314 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 LRIG1Q96JA1 1093 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 KCNC2Q96PR1 638 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CDCA3Q99618 268 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 WDR11Q9BZH6 1224 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 FN3KQ9H479 309 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 XKR8Q9H6D3 395 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 UNKLQ9H9P5 680 aaKnown RBP8.98□□□□□ -0.97
CLIP1-214ENST00000540539 CDHR5Q9HBB8 845 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 RNF19AQ9NV58 838 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 SAGE1Q9NXZ1 904 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 NLGN3Q9NZ94 848 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 PCDHA10Q9Y5I2 948 aa8.98□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 M0R129 80 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 FOXE1O00358 373 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SUSD5O60279 629 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 DIRAS1O95057 198 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 CKBP12277 381 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 RNH1P13489 461 aaKnown RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ANXA8P13928 327 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 NCF1P14598 390 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 CSF2RAP15509 400 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 NQO2P16083 231 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 FPR1P21462 350 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GGT2P36268 569 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 BDKRB1P46663 353 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 EVX1P49640 407 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 RGS4P49798 205 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 CAV3P56539 151 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 CSHL1Q14406 222 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 UBXN2BQ14CS0 331 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 NTRK2Q16620 822 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 DUOXA1Q1HG43 343 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ANXA8L1Q5VT79 327 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 OR2T5Q6IEZ7 315 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SLC39A4Q6P5W5 647 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 LCLAT1Q6UWP7 414 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF730Q6ZMV8 503 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 MDGA1Q8NFP4 955 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GPR150Q8NGU9 434 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 OR2T29Q8NH02 315 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 RNF139Q8WU17 664 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SPATA5L1Q9BVQ7 753 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 TOLLIPQ9H0E2 274 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 IKZF5Q9H5V7 419 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 WWOXQ9NZC7 414 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 UXTQ9UBK9 157 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 POLR3HQ9Y535 204 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 LRRC37A2A6NM11 1700 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 DHX15O43143 795 aaKnown RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 PSMD3O43242 534 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SLC7A4O43246 635 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 PRAMEF2O60811 474 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 F12P00748 615 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 TCRBP04435 133 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 PSAPP07602 524 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ABCD3P28288 659 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GPR3P46089 330 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 IDH2P48735 452 aaKnown RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 MAT1AQ00266 395 aaKnown RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GLO1Q04760 184 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 MTMR1Q13613 665 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 C22orf42Q6IC83 251 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 HEPHL1Q6MZM0 1159 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 FAHD1Q6P587 224 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SSX6Q7RTT6 188 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GPR149Q86SP6 731 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF227Q86WZ6 799 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SLC44A3Q8N4M1 653 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 OR52E4Q8NGH9 312 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 SOCS4Q8WXH5 440 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 AP3S1Q92572 193 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF599Q96NL3 588 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 CASD1Q96PB1 797 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GABARAPL3Q9BY60 117 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 POLDIP3Q9BY77 421 aaKnown RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-214ENST00000540539 GLRX2Q9NS18 164 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
CLIP1-214ENST00000540539 TXNL4BQ9NX01 149 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms