RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ALDH9A1P49189 494 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 FBXW4P57775 412 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 RPP38P78345 283 aaKnown RBP19.25■□□□□ 0.67
CHFR-217ENST00000540537 PMPCAQ10713 525 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 SPIN4Q56A73 249 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 WLSQ5T9L3 541 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 TMEM198Q66K66 360 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 FAM111BQ6SJ93 734 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 LRRN4CLQ8ND94 238 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 CTHRC1Q96CG8 243 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 ZNF597Q96LX8 424 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 ZNF681Q96N22 645 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 GSTO2Q9H4Y5 243 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 EXO5Q9H790 373 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 EMCNQ9ULC0 261 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 ZNF780BQ9Y6R6 833 aa19.25■□□□□ 0.67
CHFR-217ENST00000540537 SERTM1A2A2V5 107 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 PCDH7O60245 1069 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 GLRA3O75311 464 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 SNX4O95219 450 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 ESRRBO95718 433 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 ENDOUP21128 410 aaKnown RBP19.24■□□□□ 0.67
CHFR-217ENST00000540537 HTR6P50406 440 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 NAA20P61599 178 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 B3GNT6Q6ZMB0 384 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 ZNF295-AS1Q8N0V1 137 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 CNRIP1Q96F85 164 aaPredicted RBP19.24■□□□□ 0.67
CHFR-217ENST00000540537 JSRP1Q96MG2 331 aaPredicted RBP19.24■□□□□ 0.67
CHFR-217ENST00000540537 TREX2Q9BQ50 279 aaPredicted RBP19.24■□□□□ 0.67
CHFR-217ENST00000540537 NXF5Q9H1B4 397 aaKnown RBP19.24■□□□□ 0.67
CHFR-217ENST00000540537 PPCSQ9HAB8 311 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 SPRR3Q9UBC9 169 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 TNFRSF10DQ9UBN6 386 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 HEY2Q9UBP5 337 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 UTS2RQ9UKP6 389 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 DTX4Q9Y2E6 619 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 FAM215AQ9Y5M1 114 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 HCFC1P51610 2035 aa19.24■□□□□ 0.67
CHFR-217ENST00000540537 A0A1W2PPM1 405 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 G3V2L1 256 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 CBX7O95931 251 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 HOXD4P09016 255 aaPredicted RBP19.23■□□□□ 0.67
CHFR-217ENST00000540537 DRD2P14416 443 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 NAGAP17050 411 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 KRT15P19012 456 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ABCD3P28288 659 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 SSTR2P30874 369 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 SOX18P35713 384 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 RAE1P78406 368 aaKnown RBP19.23■□□□□ 0.67
CHFR-217ENST00000540537 DUSP2Q05923 314 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ACSM2AQ08AH3 577 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 DUSP8Q13202 625 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ACSM2BQ68CK6 577 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 RTL6Q6ICC9 239 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ZYG11AQ6WRX3 759 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 SH2D5Q6ZV89 423 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 CCDC71Q8IV32 467 aaPredicted RBP19.23■□□□□ 0.67
CHFR-217ENST00000540537 PRR22Q8IZ63 422 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ADCY4Q8NFM4 1077 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 NEIL3Q8TAT5 605 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 HSPBAP1Q96EW2 488 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 RILPQ96NA2 401 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 TTYH2Q9BSA4 534 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ITPAQ9BY32 194 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 ANGPTL4Q9BY76 406 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 BCAP29Q9UHQ4 241 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 DLGAP4Q9Y2H0 992 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 PCDHGB3Q9Y5G1 929 aa19.23■□□□□ 0.67
CHFR-217ENST00000540537 GNG14A0A1W2PPG7 69 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 ACOX3O15254 700 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 CDH16O75309 829 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 PPM1BO75688 479 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 ABCB1P08183 1280 aaPredicted RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 IL3P08700 152 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 GLI4P10075 376 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 MYL2P10916 166 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 GABRA1P14867 456 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 GDF1P27539 372 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 TIA1P31483 386 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHFR-217ENST00000540537 GSTM5P46439 218 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 DCAF7P61962 342 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 HMGCS1Q01581 520 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 EXOSC7Q15024 291 aaKnown RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 LTB4RQ15722 352 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 C1orf185Q5T7R7 199 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 BICRALQ6AI39 1079 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 GALNT18Q6P9A2 607 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 MEX3BQ6ZN04 569 aaKnown RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 TDRPQ86YL5 185 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 SAMD14Q8IZD0 417 aaPredicted RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 LIX1Q8N485 282 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 OR52R1Q8NGF1 315 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 ZNF675Q8TD23 568 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 ERP27Q96DN0 273 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 C11orf24Q96F05 449 aaPredicted RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 APIPQ96GX9 242 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 LCORQ96JN0 433 aaPredicted RBP19.22■□□□□ 0.67
CHFR-217ENST00000540537 KCNA7Q96RP8 456 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 SLC6A15Q9H2J7 730 aa19.22■□□□□ 0.67
CHFR-217ENST00000540537 MID1IP1Q9NPA3 183 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms