RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CPSF6Q16630 551 aaKnown RBP eCLIP11.39□□□□□ -0.59
COPS7A-211ENST00000540408 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 NUP54Q7Z3B4 507 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 YRDCQ86U90 279 aaKnown RBP11.39□□□□□ -0.59
COPS7A-211ENST00000540408 FAM83FQ8NEG4 500 aaPredicted RBP11.39□□□□□ -0.59
COPS7A-211ENST00000540408 NUDT8Q8WV74 236 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 PIGTQ969N2 578 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 ATOH8Q96SQ7 321 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 PIGMQ9H3S5 423 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 AHSPQ9NZD4 102 aa11.39□□□□□ -0.59
COPS7A-211ENST00000540408 CCDC189A1A4V9 331 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 FAM159BA6NKW6 160 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 H0Y3Z8 333 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 FOXE1O00358 373 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PGRMC2O15173 223 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 TP73O15350 636 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 TMPRSS11DO60235 418 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 SMPD2O60906 423 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PPM1BO75688 479 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 RCBTB2O95199 551 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ABCB1P08183 1280 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-211ENST00000540408 GSTA2P09210 222 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 NT5EP21589 574 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 CHMP24386 653 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PTPN6P29350 595 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 DEKP35659 375 aaKnown RBP11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ARL1P40616 181 aaPredicted RBP11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PIK3CGP48736 1102 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 XKP51811 444 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 SRYQ05066 204 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 SNTA1Q13424 505 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PFKFB4Q16877 469 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 FAM83EQ2M2I3 478 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 KBTBD12Q3ZCT8 623 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PAGE2Q7Z2X7 111 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 CCDC91Q7Z6B0 441 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 PRR22Q8IZ63 422 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 C9orf106Q8NAJ2 232 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 RHEBL1Q8TAI7 183 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 WNT2BQ93097 391 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 UCN3Q969E3 161 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ADIPOR1Q96A54 375 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 NTNG2Q96CW9 530 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 SERPINI1Q99574 410 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 GALNT8Q9NY28 637 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 KLRF1Q9NZS2 232 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ACOT9Q9Y305 439 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 TNPO3Q9Y5L0 923 aaKnown RBP11.38□□□□□ -0.59
COPS7A-211ENST00000540408 SAR1BQ9Y6B6 198 aa11.38□□□□□ -0.59
COPS7A-211ENST00000540408 ICOSLGO75144 302 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 GUCY1B2O75343 617 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 GBAP04062 536 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 CT62P0C5K7 136 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 RHOXF2BP0C7M4 288 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 PORP16435 677 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-211ENST00000540408 ALDH18A1P54886 795 aaKnown RBP11.37□□□□□ -0.59
COPS7A-211ENST00000540408 FOXF2Q12947 444 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 DCST1Q5T197 706 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 KLC3Q6P597 504 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 TMEM81Q6P7N7 255 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 AAGABQ6PD74 315 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 CMC1Q7Z7K0 106 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 IFNEQ86WN2 208 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 TRIM42Q8IWZ5 723 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 LRRC75A-AS1Q8N1F1 130 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 PPM1NQ8N819 430 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 ATP6V1E2Q96A05 226 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 INTS12Q96CB8 462 aaKnown RBP11.37□□□□□ -0.59
COPS7A-211ENST00000540408 NXNL1Q96CM4 212 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 TUBA1CQ9BQE3 449 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 BDH2Q9BUT1 245 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 OSBPL11Q9BXB4 747 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 ZNF717Q9BY31 904 aaPredicted RBP11.37□□□□□ -0.59
COPS7A-211ENST00000540408 BRINP2Q9C0B6 783 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 IPPKQ9H8X2 491 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 ZNF226Q9NYT6 803 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 WHRNQ9P202 907 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 BCAP29Q9UHQ4 241 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 PSME2Q9UL46 239 aa11.37□□□□□ -0.59
COPS7A-211ENST00000540408 EXO1Q9UQ84 846 aaKnown RBP11.37□□□□□ -0.59
COPS7A-211ENST00000540408 FREM3P0C091 2139 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 A0A087X1B8 175 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 GOLGA6L10A6NI86 522 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 SNPHO15079 494 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 ACOX3O15254 700 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 SEMA3DO95025 777 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 CLDN9O95484 217 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 CPMP14384 443 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 FPR1P21462 350 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 GPX3P22352 226 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 CPOXP36551 454 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 SLCO1A2P46721 670 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 NEK2P51955 445 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 PLCXD2Q0VAA5 305 aa11.36□□□□□ -0.59
COPS7A-211ENST00000540408 DLG1Q12959 904 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms