RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ATP5A1P25705 553 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CALCRP30988 508 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 MMP12P39900 470 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PTGFRP43088 359 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 AVPR1BP47901 424 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 STK19P49842 368 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SELENOPP49908 381 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SNX16P57768 344 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SPIN4Q56A73 249 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 RAB41Q5JT25 222 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 LDB1Q86U70 411 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 NKAIN4Q8IVV8 208 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PDZD9Q8IXQ8 264 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PHOSPHO1Q8TCT1 267 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ADAMTS19Q8TE59 1207 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 RAB7BQ96AH8 199 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 OTULINQ96BN8 352 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 HBEGFQ99075 208 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CPPED1Q9BRF8 314 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 OSGEPL1Q9H4B0 414 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 DDX31Q9H8H2 851 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 GLOD4Q9HC38 313 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 MRPL17Q9NRX2 175 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 TRPS1Q9UHF7 1281 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 MRTO4Q9UKD2 239 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 NPTNQ9Y639 398 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 TSC2P49815 1807 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 C2orf74A8MZ97 194 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 GPR37O15354 613 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SLC7A4O43246 635 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 GLP2RO95838 553 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CTSAP10619 480 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 XKP51811 444 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 RIDAP52758 137 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CTSCP53634 463 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SNRPEP62304 92 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 TNFRSF17Q02223 184 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 STX4Q12846 297 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 NTRK2Q16620 822 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SPANXN4Q5MJ08 99 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 OR7E24Q6IFN5 339 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 HFE2Q6ZVN8 426 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 FBXO39Q8N4B4 442 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 C1orf52Q8N6N3 182 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 MDGA1Q8NFP4 955 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF461Q8TAF7 563 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SPPL3Q8TCT6 385 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PEX11GQ96HA9 241 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SENP5Q96HI0 755 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 NELL2Q99435 816 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SEPT5Q99719 369 aaPredicted RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 FICDQ9BVA6 458 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ZBP1Q9H171 429 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CERS4Q9HA82 394 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 TMEM184CQ9NVA4 438 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SLC9A8Q9Y2E8 581 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 YBX2Q9Y2T7 364 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 LOC285095A0A1B0GVY8 99 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 YJEFN3A6XGL0 299 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CHURC1-FNTBB4DL54 471 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 J3KR12 359 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ADAMDEC1O15204 470 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SSNA1O43805 119 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 EGFP01133 1207 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CBR1P16152 277 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CHRNA4P43681 627 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PSMD4P55036 377 aaKnown RBP8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 LRRC74AQ0VAA2 488 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 PTGR1Q14914 329 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 RBBP7Q16576 425 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 C9orf152Q5JTZ5 239 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 ZDHHC17Q8IUH5 632 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 CBLN2Q8IUK8 224 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SLC5A8Q8N695 610 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 NPWQ8N729 165 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 HSD17B8Q92506 261 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 HSH2DQ96JZ2 352 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 EPYCQ99645 322 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 RLIMQ9NVW2 624 aa8.98□□□□□ -0.97
CTNNA1-243ENST00000540387 SYNJ2BP-COX16A0A087WUM0 186 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PLSCR5A0PG75 271 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 POM121BA6NF01 834 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PSMD3O43242 534 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ABLIM3O94929 683 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 TCRBP04435 133 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 CRYBA1P05813 215 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 RD3LP0DJH9 198 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 BPIP17213 487 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PGFP49763 221 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 VEGFCP49767 419 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 AGTR2P50052 363 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 GPR143P51810 404 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 DAOAP59103 153 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 RBBP4Q09028 425 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 NR6A1Q15406 480 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 RFTN2Q52LD8 501 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 TMIGD1Q6UXZ0 262 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 LDLRAD3Q86YD5 345 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms