RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MC3RP41968 323 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 GPR4P46093 362 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 KCNJ5P48544 419 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 LCTLQ6UWM7 567 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 KIAA0907Q7Z7F0 614 aaPredicted RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF607Q96SK3 696 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 DPEP2Q9H4A9 486 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 MAPRE3Q9UPY8 281 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 PEX16Q9Y5Y5 336 aa12.89□□□□□ -0.35
BNIP3-202ENST00000540159 VPS13AQ96RL7 3174 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 EDDM13A0A1B0GTR0 161 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.88□□□□□ -0.35
BNIP3-202ENST00000540159 SRPRAP08240 638 aaKnown RBP12.88□□□□□ -0.35
BNIP3-202ENST00000540159 BMPR1AP36894 532 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 BCL6P41182 706 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 HMGA2P52926 109 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CSNK1G2P78368 415 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CCDC85BQ15834 202 aaPredicted RBP12.88□□□□□ -0.35
BNIP3-202ENST00000540159 FAM131AQ6UXB0 335 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 RGMAQ96B86 450 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF707Q96C28 371 aaPredicted RBP12.88□□□□□ -0.35
BNIP3-202ENST00000540159 WDR34Q96EX3 536 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 AMDHD1Q96NU7 426 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 PSD2Q9BQI7 771 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 TBC1D17Q9HA65 648 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CFL2Q9Y281 166 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF860A6NHJ4 632 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 DVL2O14641 736 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 FCMRO60667 390 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 ADAP00813 363 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 FGBP02675 491 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 SDC2P34741 201 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF181Q2M3W8 571 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 OR4C11Q6IEV9 310 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 OR4F15Q8NGB8 312 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 ZCCHC10Q8TBK6 192 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
BNIP3-202ENST00000540159 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CDCA4Q9BXL8 241 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 RHBGQ9H310 441 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 COMMD3Q9UBI1 195 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 P2RX2Q9UBL9 471 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 CNTRLQ7Z7A1 2325 aa12.88□□□□□ -0.35
BNIP3-202ENST00000540159 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ZC3H12DA2A288 527 aaKnown RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 A6NIN4 97 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SLC9A3R1O14745 358 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SLC2A10O95528 541 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 APOA1P02647 267 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CASP3P42574 277 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 EPHA5P54756 1037 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TAS2R41P59536 307 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CHRNEQ04844 493 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 FUT5Q11128 374 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 EIF4HQ15056 248 aaKnown RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 FAM109BQ6ICB4 259 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SMARCD3Q6STE5 483 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TMPRSS11AQ6ZMR5 421 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KCT2Q8NC54 265 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SMAP2Q8WU79 429 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 DCLRE1CQ96SD1 692 aaKnown RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TMED9Q9BVK6 235 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 HDHD5Q9BXW7 423 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TTTY10Q9BZA0 68 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 A0A1W2PR48 441 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 DPM1O60762 260 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 PPP2R1BP30154 601 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CSTF2P33240 577 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■■■■ 34.8
BNIP3-202ENST00000540159 CRYBB2P43320 205 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 PCBP4P57723 403 aaKnown RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 OR2B6P58173 313 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF45Q02386 682 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 E2F2Q14209 437 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CRTC2Q53ET0 693 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KLHDC8AQ8IYD2 350 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ASB15Q8WXK1 588 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TM9SF4Q92544 642 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 FGF13Q92913 245 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 RAD9AQ99638 391 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms