RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 AP1M2Q9Y6Q5 423 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 A0A0G2JN53 185 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ANKDD1BA6NHY2 528 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PPM1DO15297 605 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 HPGDSO60760 199 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 BCHEP06276 602 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SOX18P35713 384 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ETV5P41161 510 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MAPK9P45984 424 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ETV1P50549 477 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 CSNK2BP67870 215 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 TARDBPQ13148 414 aaKnown RBP eCLIP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 FLYWCH1Q4VC44 716 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 YIF1BQ5BJH7 314 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PRAMEF14Q5SWL7 426 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PRAMEF13Q5VWM6 474 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 TRIM40Q6P9F5 258 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 PLET1Q6UQ28 207 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 LHFPL3Q86UP9 236 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 COMTD1Q86VU5 262 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 OTUB2Q96DC9 234 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 SLC22A4Q9H015 551 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 RNF121Q9H920 327 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MCUBQ9NWR8 336 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 TXNL4BQ9NX01 149 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 MYO15AQ9UKN7 3530 aa11.88□□□□□ -0.51
SFSWAP-208ENST00000539506 C2orf92A0A1B0GVN3 265 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 MYL12BO14950 172 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 MSL3P1P0C860 447 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 ST8SIA6P61647 398 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 IL18Q14116 193 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 QPRTQ15274 297 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF630Q2M218 657 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 WDR45BQ5MNZ6 344 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 OR4M1Q8NGD0 313 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 OR4D11Q8NGI4 311 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 GEMIN6Q8WXD5 167 aaKnown RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 TM4SF18Q96CE8 201 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CRELD1Q96HD1 420 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 SLC6A18Q96N87 628 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 MENTQ9BUN1 341 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 MVB12BQ9H7P6 319 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 FTSJ1Q9UET6 329 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 TAC3Q9UHF0 121 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 PCDHGB2Q9Y5G2 931 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 HEPACAM2A8MVW5 462 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 FGF19O95750 216 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 PRNPP04156 253 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 PTX3P26022 381 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 EVI2BP34910 448 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CTNNB1P35222 781 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 BSGP35613 385 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 AVPR1BP47901 424 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CTBP2P56545 445 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF91Q05481 1191 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 DPTQ07507 201 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 HNRNPA1L2Q32P51 320 aaKnown RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 TIMM50Q3ZCQ8 353 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 IL20RBQ6UXL0 311 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 CEACAM20Q6UY09 585 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 NATD1Q8N6N6 113 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 C12orf76Q8N812 135 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 FLCNQ8NFG4 579 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 PHF21AQ96BD5 680 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 RAD9AQ99638 391 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 TMED9Q9BVK6 235 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 DPEP2Q9H4A9 486 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 BEX1Q9HBH7 125 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 HCN2Q9UL51 889 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 ICKQ9UPZ9 632 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 SLC27A6Q9Y2P4 619 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 ENPP4Q9Y6X5 453 aa11.87□□□□□ -0.51
SFSWAP-208ENST00000539506 C17orf113A0A1B0GUU1 675 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 PRAMEF27A3QJZ7 478 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 A8MUA0 341 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 HRO43593 1189 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 PRKYO43930 277 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 EFCAB14O75071 495 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 UGT2B17O75795 530 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 ALPPL2P10696 532 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 DSTNP60981 165 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 CHRNEQ04844 493 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 CNTN1Q12860 1018 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 ZNF57Q68EA5 555 aaPredicted RBP11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 OR8H1Q8NGG4 311 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 OMA1Q96E52 524 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 PDXPQ96GD0 296 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 NELL2Q99435 816 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 YIPF4Q9BSR8 244 aa11.86□□□□□ -0.51
SFSWAP-208ENST00000539506 SERHL2Q9H4I8 314 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms