RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KLHL20Q9Y2M5 609 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 KLK4Q9Y5K2 254 aa16.88■□□□□ 0.29
GNE-204ENST00000539208 M0R3H8 397 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 TNFRSF10CO14798 259 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 ZW10O43264 779 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 GADD45AP24522 165 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 FEN1P39748 380 aaKnown RBP16.87■□□□□ 0.29
GNE-204ENST00000539208 MAGEA10P43363 369 aaPredicted RBP16.87■□□□□ 0.29
GNE-204ENST00000539208 RGS6P49758 472 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 XKP51811 444 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 FOXD4Q12950 439 aaPredicted RBP16.87■□□□□ 0.29
GNE-204ENST00000539208 ARMCX4Q5H9R4 360 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 PODNL1Q6PEZ8 512 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 TMEM107Q6UX40 140 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 USP43Q70EL4 1123 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 TRIM69Q86WT6 500 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 NRROSQ86YC3 692 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 CENPSQ8N2Z9 138 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 ELP4Q96EB1 424 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 PRRC1Q96M27 445 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 LIPT1Q9Y234 373 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 ZNF780BQ9Y6R6 833 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 A3GALT2U3KPV4 340 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 SYT5O00445 386 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 BTN3A3O00478 584 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 MAN2A2P49641 1150 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 RGS1Q08116 209 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 TARDBPQ13148 414 aaKnown RBP eCLIP16.87■□□□□ 0.29
GNE-204ENST00000539208 HTR4Q13639 388 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 KIR2DS3Q14952 304 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 MEDAGQ5VYS4 303 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 JPH3Q8WXH2 748 aaPredicted RBP16.87■□□□□ 0.29
GNE-204ENST00000539208 NR4A3Q92570 626 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 BMFQ96LC9 184 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 ROGDIQ9GZN7 287 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 SRMSQ9H3Y6 488 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 MAN2C1Q9NTJ4 1040 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 CALML5Q9NZT1 146 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 PCDHGA3Q9Y5H0 932 aa16.87■□□□□ 0.29
GNE-204ENST00000539208 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 TNFSF14O43557 240 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 ENTPD6O75354 484 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 NME6O75414 186 aaPredicted RBP16.86■□□□□ 0.29
GNE-204ENST00000539208 TP53P04637 393 aaPredicted RBP16.86■□□□□ 0.29
GNE-204ENST00000539208 C8orf89P0DMQ9 161 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 AK4P27144 223 aaPredicted RBP16.86■□□□□ 0.29
GNE-204ENST00000539208 BTN3A2P78410 334 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 C19orf48Q6RUI8 117 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 ASPGQ86U10 573 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 NUP43Q8NFH3 380 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 OR6T1Q8NGN1 323 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 OR8J1Q8NGP2 316 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 FLVCR1-AS1Q8TAF5 88 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 TM4SF19Q96DZ7 209 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 C16orf58Q96GQ5 468 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 TRNT1Q96Q11 434 aaKnown RBP16.86■□□□□ 0.29
GNE-204ENST00000539208 OR7D2Q96RA2 312 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 YIPF4Q9BSR8 244 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 MMP27Q9H306 513 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 C11orf16Q9NQ32 467 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 NTMQ9P121 344 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
GNE-204ENST00000539208 A6NCN8 305 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 H3BN98 237 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 OCM2P0CE71 109 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 OCMP0CE72 109 aaPredicted RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 NR2F6P10588 404 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 ALPPL2P10696 532 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 OCLNQ16625 522 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 SLC25A30Q5SVS4 291 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 C1orf94Q6P1W5 598 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 CASP12Q6UXS9 341 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 MRGPRX1Q96LB2 322 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 C10orf90Q96M02 699 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 SNRNP200O75643 2136 aaKnown RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 MDC1Q14676 2089 aaKnown RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 ATG2BQ96BY7 2078 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 SOX14O95416 240 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 ACADMP11310 421 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 BMP4P12644 408 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 TGFBR1P36897 503 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 RANBP1P43487 201 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 MRPS21P82921 87 aaKnown RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 NCF4Q15080 339 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 INAQ16352 499 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 TPRG1LQ5T0D9 272 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 RNLSQ5VYX0 342 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 FBXO42Q6P3S6 717 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 BTLAQ7Z6A9 289 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 KCT2Q8NC54 265 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 MORN4Q8NDC4 146 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 OTUB1Q96FW1 271 aaPredicted RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 IL4I1Q96RQ9 567 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 ZBTB20Q9HC78 741 aaPredicted RBP16.85■□□□□ 0.29
GNE-204ENST00000539208 PRDM9Q9NQV7 894 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 KCNE3Q9Y6H6 103 aa16.85■□□□□ 0.29
GNE-204ENST00000539208 A0A1W2PS29 197 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms