RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 PRODH2Q9UF12 536 aa10.64□□□□□ -0.71
RTN3-209ENST00000538995 LGALS13Q9UHV8 139 aa10.64□□□□□ -0.71
RTN3-209ENST00000538995 CNOT11Q9UKZ1 510 aaKnown RBP10.64□□□□□ -0.71
RTN3-209ENST00000538995 DLGAP4Q9Y2H0 992 aa10.64□□□□□ -0.71
RTN3-209ENST00000538995 WBP11Q9Y2W2 641 aaKnown RBP10.64□□□□□ -0.71
RTN3-209ENST00000538995 NPFFR2Q9Y5X5 522 aa10.64□□□□□ -0.71
RTN3-209ENST00000538995 MYO7BQ6PIF6 2116 aa10.64□□□□□ -0.71
RTN3-209ENST00000538995 LRRC3CA6NJW4 275 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 NPIPB8E9PQR5 432 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 AQP7O14520 342 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 BCAS2O75934 225 aaPredicted RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 SLITRK5O94991 958 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 SNX4O95219 450 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 CLDN14O95500 239 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 CBX7O95931 251 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 ANXA4P09525 319 aaPredicted RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 UROSP10746 265 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 DDCP20711 480 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 PIGAP37287 484 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 MAGEA5P43359 124 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 FOXA1P55317 472 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 SLC10A1Q14973 349 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 CEBPEQ15744 281 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 IMPG1Q17R60 797 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 PRAMEF20Q5VT98 475 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 FAM219BQ5XKK7 198 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 TMEM211Q6ICI0 200 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 TMEM81Q6P7N7 255 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 TRABD2AQ86V40 505 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 C4orf33Q8N1A6 199 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 SPPL2AQ8TCT8 520 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 AENQ8WTP8 325 aaKnown RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 C16orf78Q8WTQ4 265 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 CAVIN3Q969G5 261 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 HSPBAP1Q96EW2 488 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 ZNF597Q96LX8 424 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 SMC6Q96SB8 1091 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 DOHHQ9BU89 302 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 ROPN1BQ9BZX4 212 aaPredicted RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 RUBCNLQ9H714 662 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 ROPN1Q9HAT0 212 aaPredicted RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 PROK2Q9HC23 129 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
RTN3-209ENST00000538995 HEY2Q9UBP5 337 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 PLLPQ9Y342 182 aa10.63□□□□□ -0.71
RTN3-209ENST00000538995 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 TO15178 435 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 ZNF500O60304 480 aaPredicted RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 TRIM13O60858 407 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 TRIM3O75382 744 aaPredicted RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 PPM1BO75688 479 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 PDE9AO76083 593 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 SLU7O95391 586 aaKnown RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 NEFHP12036 1026 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 PRPH2P23942 346 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 ABCD3P28288 659 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 HTR1EP28566 365 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 SOX18P35713 384 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 MAN2A2P49641 1150 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 DUSP2Q05923 314 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 DUSP8Q13202 625 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 PCLAFQ15004 111 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 ZNF628Q5EBL2 1059 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 SPDYAQ5MJ70 313 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 FAM111BQ6SJ93 734 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 IKBIPQ70UQ0 350 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 C10orf107Q8IVU9 208 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 BANPQ8N9N5 519 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 OR52R1Q8NGF1 315 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 OR2W6PQ8NHA6 318 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 DIO2Q92813 273 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 SARAFQ96BY9 339 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 LCORQ96JN0 433 aaPredicted RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 ITPAQ9BY32 194 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 STMN4Q9H169 189 aaPredicted RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 NXF5Q9H1B4 397 aaKnown RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 ACKR4Q9NPB9 350 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 MYNNQ9NPC7 610 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 PFDN4Q9NQP4 134 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 TAS2R7Q9NYW3 318 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 BCAP29Q9UHQ4 241 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 DTX4Q9Y2E6 619 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 PCDHGB3Q9Y5G1 929 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 LIPGQ9Y5X9 500 aa10.62□□□□□ -0.71
RTN3-209ENST00000538995 NCOA6Q14686 2063 aaPredicted RBP10.62□□□□□ -0.71
RTN3-209ENST00000538995 PCNX1Q96RV3 2341 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TRGV5A0A0B4J1U4 118 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ATP6AP2A0A1C7CYW4 349 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 TLDC2A0PJX2 215 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 FRG2CA6NGY1 282 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ZNHIT1O43257 154 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 PLOD3O60568 738 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 ATP6AP2O75787 350 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 PCSK2P16519 638 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 DRD5P21918 477 aa10.61□□□□□ -0.71
RTN3-209ENST00000538995 MPIP34949 423 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms