RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OXSMQ9NWU1 459 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 NMRK1Q9NWW6 199 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 SIRT5Q9NXA8 310 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 MKS1Q9NXB0 559 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 COQ3Q9NZJ6 369 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 MAT2BQ9NZL9 334 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 MCM8Q9UJA3 840 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 BOKQ9UMX3 212 aaPredicted RBP13.76□□□□□ -0.21
RAB40B-202ENST00000538809 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 DOCK7Q96N67 2140 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 ADGRG4Q8IZF6 3080 aa13.76□□□□□ -0.21
RAB40B-202ENST00000538809 FAM90A27PA6NNH2 459 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 COPEO14579 308 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 PCDH7O60245 1069 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 IL3P08700 152 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 KRT4P19013 534 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ENDOUP21128 410 aaKnown RBP13.75□□□□□ -0.21
RAB40B-202ENST00000538809 NAGLUP54802 743 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 NUP107P57740 925 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 MGAT2Q10469 447 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 DUSP8Q13202 625 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 RPS6KA2Q15349 733 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 PRICKLE4Q2TBC4 344 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF585AQ6P3V2 769 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 GALNT18Q6P9A2 607 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 C4orf33Q8N1A6 199 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 RIBC1Q8N443 379 aaPredicted RBP13.75□□□□□ -0.21
RAB40B-202ENST00000538809 CCNYL1Q8N7R7 359 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 DIO2Q92813 273 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ADIPOR1Q96A54 375 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
RAB40B-202ENST00000538809 APIPQ96GX9 242 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF597Q96LX8 424 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF681Q96N22 645 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 DOHHQ9BU89 302 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 EBPLQ9BY08 206 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ITPAQ9BY32 194 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 NXF5Q9H1B4 397 aaKnown RBP13.75□□□□□ -0.21
RAB40B-202ENST00000538809 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 MID1IP1Q9NPA3 183 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ZFP64Q9NPA5 681 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 PFDN4Q9NQP4 134 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 CNIH4Q9P003 139 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 SPRR3Q9UBC9 169 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 HEY2Q9UBP5 337 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 LGALS13Q9UHV8 139 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 ZNF639Q9UID6 485 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 RNF6Q9Y252 685 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 NPFFR2Q9Y5X5 522 aa13.75□□□□□ -0.21
RAB40B-202ENST00000538809 TRGV5A0A0B4J1U4 118 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 AQP7O14520 342 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 SLU7O95391 586 aaKnown RBP13.74□□□□□ -0.21
RAB40B-202ENST00000538809 ATP1B1P05026 303 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CPA3P15088 417 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CSNK2A2P19784 350 aaPredicted RBP13.74□□□□□ -0.21
RAB40B-202ENST00000538809 PTGER4P35408 488 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 TRPC1P48995 793 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 MRPS35P82673 323 aaKnown RBP13.74□□□□□ -0.21
RAB40B-202ENST00000538809 BTKQ06187 659 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 PMPCAQ10713 525 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 SLC10A1Q14973 349 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 PCLAFQ15004 111 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 TMEM211Q6ICI0 200 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 EMBQ6PCB8 327 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 GDF7Q7Z4P5 450 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 TRABD2AQ86V40 505 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CCDC71Q8IV32 467 aaPredicted RBP13.74□□□□□ -0.21
RAB40B-202ENST00000538809 BANPQ8N9N5 519 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 OR7G1Q8NGA0 311 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 RND1Q92730 232 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CAVIN3Q969G5 261 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 TP53INP1Q96A56 240 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CTHRC1Q96CG8 243 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 TRIM8Q9BZR9 551 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 RUBCNLQ9H714 662 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 UTS2RQ9UKP6 389 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 DLGAP4Q9Y2H0 992 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 CSMD1Q96PZ7 3565 aa13.74□□□□□ -0.21
RAB40B-202ENST00000538809 GNG14A0A1W2PPG7 69 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 NKX2-6A6NCS4 301 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 CAPN14A8MX76 684 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 H3BQF6 201 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 TP53I11O14683 189 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 BCKDKO14874 412 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 CBX7O95931 251 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 PCSK2P16519 638 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ACVR2AP27037 513 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 GDF1P27539 372 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ABCD3P28288 659 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 TIA1P31483 386 aaKnown RBP eCLIP13.73□□□□□ -0.21
RAB40B-202ENST00000538809 TMED10P49755 219 aaKnown RBP13.73□□□□□ -0.21
RAB40B-202ENST00000538809 NRG3P56975 720 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
RAB40B-202ENST00000538809 MAP4K2Q12851 820 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms