RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CMTM6Q9NX76 183 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 DLL3Q9NYJ7 618 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 TMEM181Q9P2C4 612 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 PRODH2Q9UF12 536 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ERVK-19Q9WJR5 959 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CFL2Q9Y281 166 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 CNOT1A5YKK6 2376 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 KIF26BQ2KJY2 2108 aa9.97□□□□□ -0.81
TNFRSF1A-211ENST00000538363 ELOVL7A1L3X0 281 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PLOD2O00469 737 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PEX12O00623 359 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NME4O00746 187 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC28A2O43868 658 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PRAMEF2O60811 474 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DKK1O94907 266 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NR2F1P10589 423 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GALNSP34059 522 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MSX2P35548 267 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GSK3BP49841 420 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TXNL4AP83876 142 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RHAGQ02094 409 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 EEF1A2Q05639 463 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DUSP2Q05923 314 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MAP4K2Q12851 820 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FADDQ13158 208 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GAB1Q13480 694 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DNASE1L3Q13609 305 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SELPLGQ14242 412 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FLOT2Q14254 428 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RGNQ15493 299 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPAT3Q53EU6 434 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LCN10Q6JVE6 187 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RNF111Q6ZNA4 994 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC29A4Q7RTT9 530 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CPEB2Q7Z5Q1 589 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPATA24Q86W54 205 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DHFR2Q86XF0 187 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PROSER1Q86XN7 944 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MICU2Q8IYU8 434 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 C11orf65Q8NCR3 313 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM156AQ8NDB6 213 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR7G2Q8NG99 324 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR7G1Q8NGA0 311 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR52R1Q8NGF1 315 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SUN3Q8TAQ9 357 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FBXO30Q8TB52 745 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF675Q8TD23 568 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPR151Q8TDV0 419 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NXPE2Q96DL1 559 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NEURL3Q96EH8 262 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RSRC1Q96IZ7 334 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC46A1Q96NT5 459 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MS4A4EQ96PG1 132 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPATA9Q9BWV2 254 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPR87Q9BY21 358 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ACTRT3Q9BYD9 372 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC26A1Q9H2B4 701 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR51I1Q9H343 314 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CXorf21Q9HAI6 301 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC22A11Q9NSA0 550 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SLC6A13Q9NSD5 602 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 EGFL7Q9UHF1 273 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KCND3Q9UK17 655 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ANGPT4Q9Y264 503 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RRP15Q9Y3B9 282 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR10H1Q9Y4A9 318 aa9.96□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PTPRBP23467 1997 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IGLV3-12A0A075B6K2 115 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A0A087WV62 115 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TCRBV16S1A1N1A0A5B0 115 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 VSTM2BA6NLU5 285 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM220BPB1ANY3 271 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FXYD1O00168 92 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PCDH17O14917 1159 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PLOD3O60568 738 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SOX30O94993 753 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ONECUT2O95948 504 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IFNA14P01570 189 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HMGN2P05204 90 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CYC1P08574 325 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RAB40ALP0C0E4 278 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR12D1P0DN82 309 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ETFAP13804 333 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GPX2P18283 190 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KRT20P35900 424 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RFX3P48380 749 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RPS26P62854 115 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IGLV3-21P80748 117 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CEACAM7Q14002 265 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TRIM25Q14258 630 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CEBPEQ15744 281 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF630Q2M218 657 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PRICKLE4Q2TBC4 344 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF628Q5EBL2 1059 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 INTS11Q5TA45 600 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SAXO2Q658L1 398 aa9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF385CQ66K41 422 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GLYATQ6IB77 296 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms