RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 LINC00471Q8N535 108 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 NUP43Q8NFH3 380 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 OTUB1Q96FW1 271 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 CRELD1Q96HD1 420 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 SMIM10Q96HG1 83 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 FCRL4Q96PJ5 515 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 OR2A5Q96R48 311 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 OR7D2Q96RA2 312 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 CDCA4Q9BXL8 241 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 PINK1Q9BXM7 581 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 ROGDIQ9GZN7 287 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 CLDND1Q9NY35 253 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 KCMF1Q9P0J7 381 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 NTMQ9P121 344 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 B3GNT3Q9Y2A9 372 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 KCNE3Q9Y6H6 103 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 ZNF780BQ9Y6R6 833 aa10.75□□□□□ -0.69
SLC28A1-204ENST00000538177 SYT5O00445 386 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 UGT2B17O75795 530 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ZNF888P0CJ79 500 aaPredicted RBP10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ALDH4A1P30038 563 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 AKT2P31751 481 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 MC3RP41968 323 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 SLC15A1P46059 708 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 RAB15P59190 212 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 NCS1P62166 190 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ALDH6A1Q02252 535 aaKnown RBP10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 COX10Q12887 443 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 SYT16Q17RD7 645 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 EOGTQ5NDL2 527 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 TMEM201Q5SNT2 666 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 C12orf73Q69YU5 71 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 PODNL1Q6PEZ8 512 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 SLC46A3Q7Z3Q1 461 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 TRIM73Q86UV7 250 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 OR6T1Q8NGN1 323 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 OR9A2Q8NGT5 310 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 C9orf43Q8TAL5 461 aaPredicted RBP10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ZNF675Q8TD23 568 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ZFPM2Q8WW38 1151 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 RPL3LQ92901 407 aaKnown RBP10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 NECTIN4Q96NY8 510 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 FNDC11Q9BVV2 318 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 ALOXE3Q9BYJ1 711 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 POLR2J3Q9H1A7 115 aaKnown RBP10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 MAN2C1Q9NTJ4 1040 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 LIPT1Q9Y234 373 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 HS3ST3A1Q9Y663 406 aa10.74□□□□□ -0.69
SLC28A1-204ENST00000538177 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 EFCAB9A8MZ26 197 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 CLDN25C9JDP6 229 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 J3QRK9 145 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TLR4O00206 839 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 NARSO43776 548 aaKnown RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 CTSVO60911 334 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TP53P04637 393 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SLC35G6P0C7Q6 338 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 ADORA3P0DMS8 318 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PIPP12273 146 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 UGT2B7P16662 529 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 ZNF12P17014 697 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 MAGP20916 626 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 UGT2B10P36537 528 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SERPINB10P48595 397 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SNRPNP63162 240 aaKnown RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TARDBPQ13148 414 aaKnown RBP eCLIP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 ZNF846Q147U1 533 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 GPAT3Q53EU6 434 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 C16orf87Q6PH81 154 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SAMD14Q8IZD0 417 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 RPLP0P6Q8NHW5 317 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 KLHL6Q8WZ60 621 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 GIMAP5Q96F15 307 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PRRC1Q96M27 445 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TRNT1Q96Q11 434 aaKnown RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SLC38A1Q9H2H9 487 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SLC25A19Q9HC21 320 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 AKIP1Q9NQ31 210 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 FBXO8Q9NRD0 319 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 GIN1Q9NXP7 522 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 GALNT8Q9NY28 637 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 CALML5Q9NZT1 146 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PILRAQ9UKJ1 303 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PMF1-BGLAPU3KQ54 211 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 COL4A2P08572 1712 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TOR1BO14657 336 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 NADKO95544 446 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 PTHP01270 115 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 GABRG2P18507 467 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 BUD31P41223 144 aaPredicted RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 XKP51811 444 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TNFRSF17Q02223 184 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 TFF2Q03403 129 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 RELAQ04206 551 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 SUZ12Q15022 739 aaKnown RBP10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
SLC28A1-204ENST00000538177 FCRL6Q6DN72 434 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms