RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 WDR81Q562E7 1941 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ATE1O95260 518 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 MT-CO2P00403 227 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 MPC1LP0DKB6 136 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 CCINQ13939 588 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ELOAQ14241 798 aaKnown RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RAB30Q15771 203 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 EXOC3L2Q2M3D2 409 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 CCBE1Q6UXH8 406 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RNF111Q6ZNA4 994 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF100Q8IYN0 542 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 GATSQ8NAP1 163 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 AUTS2Q8WXX7 1259 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 C22orf15Q8WYQ4 148 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 FBXL18Q96ME1 805 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 OR4K3Q96R72 315 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 A0A0G2JLL6 359 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF860A6NHJ4 632 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF487B1APH4 448 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 LILRB5O75023 590 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RASAL1O95294 804 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 APBB3O95704 486 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 HAPLN1P10915 354 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ADRB3P13945 408 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 IRF2P14316 349 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 ELK4P28324 431 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 HNRNPKP61978 463 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■■■□ 23.8
CLIP1-209ENST00000537178 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 PRKCZQ05513 592 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 LY6G5CQ5SRR4 150 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 C22orf42Q6IC83 251 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 TTLL10Q6ZVT0 673 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 KBTBD6Q86V97 674 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 TXNDC5Q8NBS9 432 aaKnown RBP10.17□□□□□ -0.78
CLIP1-209ENST00000537178 OR5L2Q8NGL0 311 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 OR6Q1Q8NGQ2 317 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 OR2T4Q8NH00 348 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 RHEBL1Q8TAI7 183 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 CNIH3Q8TBE1 160 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 C14orf119Q9NWQ9 140 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 Q9Y3F1 56 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 HSPE1-MOB4S4R3N1 261 aa10.17□□□□□ -0.78
CLIP1-209ENST00000537178 hCG_1807616A0A1W2PRN6 198 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MEGF11A6BM72 1044 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 KIAA0513O60268 411 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 PITPNBP48739 271 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SSTP61278 116 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 NKX3-2P78367 333 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RAB31Q13636 194 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 CATSPEREQ5SY80 951 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 OR52P1PQ8NH57 321 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 CNN2Q99439 309 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 DPCDQ9BVM2 203 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 NRXN2Q9P2S2 1712 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RPH3AQ9Y2J0 694 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 EEF1E1-BLOC1S5C9J1V9 151 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SOCS2O14508 198 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RGS9O75916 674 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RAB41Q5JT25 222 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SLC22A10Q63ZE4 541 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ENDOVQ8N8Q3 282 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 GLYATL1Q969I3 302 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MSLNLQ96KJ4 702 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MVB12BQ9H7P6 319 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 PAQR5Q9NXK6 330 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 HMX3A6NHT5 357 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 F7P08709 466 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 DRD2P14416 443 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 HLCSP50747 726 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 NPRL3Q12980 569 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 AKR1C8PQ5T2L2 129 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 KANK2Q63ZY3 851 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 OR52E8Q6IFG1 317 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF783Q6ZMS7 281 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ERN2Q76MJ5 926 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 LRRC25Q8N386 305 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 GTPBP8Q8N3Z3 284 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 C7orf50Q9BRJ6 194 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RETREG1Q9H6L5 497 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 PDE7BQ9NP56 450 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 STUB1Q9UNE7 303 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ADAM18Q9Y3Q7 739 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 PLIN4Q96Q06 1357 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 PTNP21246 168 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ACVR1BP36896 505 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ALDH3B1P43353 468 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 LSSP48449 732 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 IDH3GP51553 393 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 MEF2AQ02078 507 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 CRYZQ08257 329 aaKnown RBP10.16□□□□□ -0.78
CLIP1-209ENST00000537178 RAB11BQ15907 218 aa10.16□□□□□ -0.78
CLIP1-209ENST00000537178 ZNF423Q2M1K9 1284 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms