RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PLAUP00749 431 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 IFNA2P01563 188 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 THBS1P07996 1170 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 SLC35E2BP0CK96 405 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 SLC35E2P0CK97 266 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 NCF1P14598 390 aaPredicted RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 ZNF708P17019 499 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 GMPRP36959 345 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 SSR2P43308 183 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 HSPA7P48741 367 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 CLDN15P56746 228 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 CHIT1Q13231 466 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 SETDB1Q15047 1291 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PDK4Q16654 411 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 CYP1B1Q16678 543 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 CDKL4Q5MAI5 379 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 DNM1P46Q6ZS02 220 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 ZC3HC1Q86WB0 502 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 C17orf47Q8NEP4 570 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 OR7G3Q8NG95 312 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 TMEM171Q8WVE6 324 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 MAGOHBQ96A72 148 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PGM2Q96G03 612 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 NODALQ96S42 347 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PELOQ9BRX2 385 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 TMEM204Q9BSN7 226 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 REG4Q9BYZ8 158 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PHACTR1Q9C0D0 580 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 NXF5Q9H1B4 397 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 ELOVL5Q9NYP7 299 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PRR14LQ5THK1 2151 aa9.64□□□□□ -0.87
TM9SF1-210ENST00000530563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■□□□ 13.9
TM9SF1-210ENST00000530563 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 C16orf97H3BN30 126 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 OVOL3O00110 214 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 PGRMC2O15173 223 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 TLX2O43763 284 aaPredicted RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 CD5LO43866 347 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 OR10H2O60403 315 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 CDH16O75309 829 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 EEDO75530 441 aaKnown RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 SMNDC1O75940 238 aaKnown RBP eCLIP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 RHOXF2BP0C7M4 288 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 NAGAP17050 411 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 GPX3P22352 226 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 TMED10P49755 219 aaKnown RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 ATP5J2P56134 94 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 B3GALT5-AS1P59052 145 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 IRF8Q02556 426 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 MGAT2Q10469 447 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 SNTA1Q13424 505 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 LAPTM5Q13571 262 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 FRG1Q14331 258 aaKnown RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 GUSBP1Q15486 140 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 CLEC12BQ2HXU8 276 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 KRTAP24-1Q3LI83 254 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 C10orf62Q5T681 223 aaPredicted RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 STEAP4Q687X5 459 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 ANKRD34AQ69YU3 496 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 SULT1C3Q6IMI6 304 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 SLC30A6Q6NXT4 461 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 CCDC137Q6PK04 289 aaKnown RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 ENPP6Q6UWR7 440 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 FRA10AC1Q70Z53 315 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 NUP54Q7Z3B4 507 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 SPATA6LQ8N4H0 392 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 ZNF611Q8N823 705 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 CMTM7Q96FZ5 175 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 ZC3HAV1LQ96H79 300 aaKnown RBP9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 FAM111AQ96PZ2 611 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 KRT12Q99456 494 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 NAT9Q9BTE0 207 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 OR10A5Q9H207 317 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 PHF11Q9UIL8 331 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 MAPRE3Q9UPY8 281 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 DLGAP4Q9Y2H0 992 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 PKD1L1Q8TDX9 2849 aa9.63□□□□□ -0.87
TM9SF1-210ENST00000530563 A0A0A6YYD5 115 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 FAM95CA0A1B0GW59 222 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 EMC8O43402 210 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 ZIC3O60481 467 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 CD8BP10966 210 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 POU2F1P14859 743 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 TLX1P31314 330 aaPredicted RBP9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 BSGP35613 385 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 ARFIP1P53367 373 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 NRG3P56975 720 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 RPS13P62277 151 aaKnown RBP9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 RPP38P78345 283 aaKnown RBP9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 OR4D1Q15615 310 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 BCL2A1Q16548 175 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 HIST2H2ACQ16777 129 aaPredicted RBP9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 PAGE2BQ5JRK9 111 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 HIST2H2AA3Q6FI13 130 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 SCIMPQ6UWF3 145 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 GRAMD2AQ8IUY3 354 aa9.62□□□□□ -0.87
TM9SF1-210ENST00000530563 TCAIMQ8N3R3 496 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms