RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 GPRIN3Q6ZVF9 776 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ACAD11Q709F0 780 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ANKHD1Q8IWZ3 2542 aaKnown RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 LILRB4Q8NHJ6 448 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 NEIL3Q8TAT5 605 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 SPPL2AQ8TCT8 520 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 DIO2Q92813 273 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 SARAFQ96BY9 339 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 TM4SF18Q96CE8 201 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 CNRIP1Q96F85 164 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 JSRP1Q96MG2 331 aaPredicted RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 SECISBP2Q96T21 854 aaKnown RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 RHOXF2Q9BQY4 288 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 TTYH2Q9BSA4 534 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 FAIM2Q9BWQ8 316 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ITPAQ9BY32 194 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 BRINP2Q9C0B6 783 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 NXF5Q9H1B4 397 aaKnown RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 SLC6A15Q9H2J7 730 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 UBQLN3Q9H347 655 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 LDAHQ9H6V9 325 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ACKR4Q9NPB9 350 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 NMRK1Q9NWW6 199 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 VPS29Q9UBQ0 182 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 MCM8Q9UJA3 840 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 STK38LQ9Y2H1 464 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 NPFFR2Q9Y5X5 522 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 PDZD2O15018 2839 aa8.67□□□□□ -1.02
SF3B2-204ENST00000525207 ANKRD17O75179 2603 aaKnown RBP8.67□□□□□ -1.02
SF3B2-204ENST00000525207 KIAA1549Q9HCM3 1950 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 OTOGQ6ZRI0 2925 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 NKX2-6A6NCS4 301 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PCDH7O60245 1069 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 GLRA3O75311 464 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ERAL1O75616 437 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 TOXO94900 526 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CBX7O95931 251 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ENO1P06733 434 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 GSTA1P08263 222 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CSNK2A2P19784 350 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 GDF1P27539 372 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ABCD3P28288 659 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 TIA1P31483 386 aaKnown RBP eCLIP8.66□□□□□ -1.024e-13■■■□□ 16.8
SF3B2-204ENST00000525207 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 FEN1P39748 380 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ALDH9A1P49189 494 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PRKAA2P54646 552 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PKNOX1P55347 436 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 RAE1P78406 368 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 MGAT2Q10469 447 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PMPCAQ10713 525 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 MAP4K2Q12851 820 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 EXOSC7Q15024 291 aaKnown RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 LTB4RQ15722 352 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 SPIN4Q56A73 249 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 C1orf185Q5T7R7 199 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 FNDC7Q5VTL7 733 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ZNF585AQ6P3V2 769 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 TMEM81Q6P7N7 255 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 FAM111BQ6SJ93 734 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CCDC71Q8IV32 467 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PRR22Q8IZ63 422 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 GBP7Q8N8V2 638 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 LRRN4CLQ8ND94 238 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ZNF675Q8TD23 568 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CHTF18Q8WVB6 975 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CTHRC1Q96CG8 243 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 NTNG2Q96CW9 530 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 C11orf24Q96F05 449 aaPredicted RBP8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ZNF681Q96N22 645 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 RILPQ96NA2 401 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 HS3ST6Q96QI5 342 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 GSTO2Q9H4Y5 243 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 EXO5Q9H790 373 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 TBK1Q9UHD2 729 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ZNF639Q9UID6 485 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 UTS2RQ9UKP6 389 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 ACAD8Q9UKU7 415 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 EMCNQ9ULC0 261 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 CFL2Q9Y281 166 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PLLPQ9Y342 182 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 PCDHGB3Q9Y5G1 929 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 MED12Q93074 2177 aa8.66□□□□□ -1.02
SF3B2-204ENST00000525207 F8P00451 2351 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 DOCK7Q96N67 2140 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 ACOX3O15254 700 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 ULK1O75385 1050 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 PPM1BO75688 479 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 SNX4O95219 450 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 ESRRBO95718 433 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 IL3P08700 152 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 GLI4P10075 376 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 GABRA1P14867 456 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 PCSK2P16519 638 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 KRT15P19012 456 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 IMPDH1P20839 514 aa8.65□□□□□ -1.02
SF3B2-204ENST00000525207 ELAVL4P26378 380 aaKnown RBP8.65□□□□□ -1.02
SF3B2-204ENST00000525207 ADH7P40394 386 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms