RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CPN2P22792 545 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 ATP5A1P25705 553 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 KCNC1P48547 511 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 THOC5Q13769 683 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 DHX34Q14147 1143 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 HIST2H2BDQ6DRA6 164 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 FAM214BQ7L5A3 538 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 ACOT4Q8N9L9 421 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 RHBDF1Q96CC6 855 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 OSBPL11Q9BXB4 747 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 NT5DC2Q9H857 520 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 SPACA6W5XKT8 324 aa12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 PRKDCP78527 4128 aaKnown RBP12.44□□□□□ -0.42
NKX3-1-202ENST00000523261 LOC100289279A0A1B0GTE1 492 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ANKDD1BA6NHY2 528 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 RTCAO00442 366 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 KIAA0513O60268 411 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ENO2P09104 434 aaPredicted RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ABCD3P28288 659 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 SRD5A2P31213 254 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 SSTR4P31391 388 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 CLDN15P56746 228 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 NRG3P56975 720 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TPM4P67936 248 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 LSM11P83369 360 aaKnown RBP eCLIP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TGM3Q08188 693 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 PRR31Q5SQ13 230 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 HLA-DQA1Q5Y7H0 255 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 KBTBD8Q8NFY9 601 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 RIT1Q92963 219 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 HGDQ93099 445 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ADIPOR1Q96A54 375 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 MSI2Q96DH6 328 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 NODALQ96S42 347 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TACO1Q9BSH4 297 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TSGA10Q9BZW7 698 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TRIM2Q9C040 744 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ROGDIQ9GZN7 287 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 RPF2Q9H7B2 306 aaKnown RBP12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 TAS2R13Q9NYV9 303 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 WHRNQ9P202 907 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 FBXO5Q9UKT4 447 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF175Q9Y473 711 aa12.43□□□□□ -0.42
NKX3-1-202ENST00000523261 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 TNFRSF21O75509 655 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 PPM1BO75688 479 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 SCELO95171 688 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 GNAZP19086 355 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 USF1P22415 310 aaPredicted RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 CDKN2DP55273 166 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 BASP1P80723 227 aaKnown RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 SNTA1Q13424 505 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 ATG4DQ86TL0 474 aaPredicted RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 GPSM1Q86YR5 675 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 UBQLNLQ8IYU4 475 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 KRT78Q8N1N4 520 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 LRRC57Q8N9N7 239 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 FAM168AQ92567 244 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 PROX1Q92786 737 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 PELOQ9BRX2 385 aaKnown RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 TBCDQ9BTW9 1192 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 PINK1Q9BXM7 581 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
NKX3-1-202ENST00000523261 TCRBV7S3A2A0A539 114 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 H0YC42 278 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 ZIC3O60481 467 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 AIFM1O95831 613 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PEPDP12955 493 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 KRT15P19012 456 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 HIST1H1TP22492 207 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 TPD52P55327 224 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 IL2P60568 153 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PPP1R3AQ16821 1122 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 RBM20Q5T481 1227 aaKnown RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PLCZ1Q86YW0 608 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 ZFAND2BQ8WV99 257 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 C1orf54Q8WWF1 131 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 ANKRD7Q92527 254 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 TANKQ92844 425 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 VPS39Q96JC1 886 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 ADAD1Q96M93 576 aaKnown RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 FRMD8P1Q9BZ68 369 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PITHD1Q9GZP4 211 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 KLRF1Q9NZS2 232 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PLCE1Q9P212 2302 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms