RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 METTL7AQ9H8H3 244 aa14.1□□□□□ -0.15
MRPS28-209ENST00000522987 GALNT9Q9HCQ5 603 aa14.1□□□□□ -0.15
MRPS28-209ENST00000522987 FARSBQ9NSD9 589 aaKnown RBP14.1□□□□□ -0.15
MRPS28-209ENST00000522987 MAPRE3Q9UPY8 281 aa14.1□□□□□ -0.15
MRPS28-209ENST00000522987 TSC22D4Q9Y3Q8 395 aa14.1□□□□□ -0.15
MRPS28-209ENST00000522987 HEATR5AQ86XA9 2040 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 A0A1B0GTL3 188 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 CAPN14A8MX76 684 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 AHRRA9YTQ3 701 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
MRPS28-209ENST00000522987 CPMP14384 443 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 GPX3P22352 226 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 ABCD3P28288 659 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 CASQ1P31415 396 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 SERPINB8P50452 374 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 NAGLUP54802 743 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 NRG3P56975 720 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 GUCY2DQ02846 1103 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 CAV1Q03135 178 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 SRYQ05066 204 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 FUT7Q11130 342 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 LTB4RQ15722 352 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 TBCELQ5QJ74 424 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 CCNYL2Q5T2Q4 361 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 LACC1Q8IV20 430 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 C9orf106Q8NAJ2 232 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 FAM83FQ8NEG4 500 aaPredicted RBP14.09□□□□□ -0.15
MRPS28-209ENST00000522987 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 WDYHV1Q96HA8 205 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 NODALQ96S42 347 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 UBQLN3Q9H347 655 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 ZBTB26Q9HCK0 441 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 SERHLQ9NQF3 203 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
MRPS28-209ENST00000522987 SLC12A4Q9UP95 1085 aa14.09□□□□□ -0.15
MRPS28-209ENST00000522987 FLNAP21333 2647 aaKnown RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ANKRD33BA6NCL7 494 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 FOXE1O00358 373 aaPredicted RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 PPP6CO00743 305 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 UGDHO60701 494 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 HPNP05981 417 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 PORP16435 677 aaPredicted RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 SLCO1A2P46721 670 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ALDH9A1P49189 494 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 TMED10P49755 219 aaKnown RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 MAPK12P53778 367 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 TRAF3Q13114 568 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 NSUN5P2Q63ZY6 315 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 FRG2Q64ET8 278 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 VASNQ6EMK4 673 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 SYT10Q6XYQ8 523 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 VWA5B2Q8N398 1253 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 CHDHQ8NE62 594 aaPredicted RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 OR1J4Q8NGS1 313 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 UHMK1Q8TAS1 419 aaKnown RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 FAM222BQ8WU58 562 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ABTB1Q969K4 478 aaPredicted RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 OMA1Q96E52 524 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 FRG2BQ96QU4 278 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 PRDM14Q9GZV8 571 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 CXXC4Q9H2H0 198 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ANKRA2Q9H9E1 313 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 XPR1Q9UBH6 696 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 PCTPQ9UKL6 214 aa14.08□□□□□ -0.16
MRPS28-209ENST00000522987 TNPO3Q9Y5L0 923 aaKnown RBP14.08□□□□□ -0.16
MRPS28-209ENST00000522987 ZNF469Q96JG9 3925 aaPredicted RBP14.07□□□□□ -0.16
MRPS28-209ENST00000522987 TUBAL3A6NHL2 446 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 PPM1BO75688 479 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 SEMA3DO95025 777 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 SNX4O95219 450 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 S1PR1P21453 382 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 PTPN6P29350 595 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 GALNSP34059 522 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
MRPS28-209ENST00000522987 ARFIP1P53367 373 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 CDH13P55290 713 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 MRPS35P82673 323 aaKnown RBP14.07□□□□□ -0.16
MRPS28-209ENST00000522987 FOXF2Q12947 444 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 IFT88Q13099 833 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 TIGD3Q6B0B8 471 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 Q71RC1 249 aaPredicted RBP14.07□□□□□ -0.16
MRPS28-209ENST00000522987 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 LUZP2Q86TE4 346 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 OR4F6Q8NGB9 312 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 NINJ1Q92982 152 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 LRRC46Q96FV0 321 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 OSBPL11Q9BXB4 747 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 MAT2BQ9NZL9 334 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 KLRF1Q9NZS2 232 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 PCDHGB3Q9Y5G1 929 aa14.07□□□□□ -0.16
MRPS28-209ENST00000522987 FAM221AA4D161 298 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 ICOSLGO75144 302 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PDYNP01213 254 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TMIGD3P0DMS9 266 aaPredicted RBP14.06□□□□□ -0.16
MRPS28-209ENST00000522987 CTSSP25774 331 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TIMP3P35625 211 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms