RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 C16orf78Q8WTQ4 265 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 CA5BP1Q8WTZ4 195 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 DIO2Q92813 273 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 CTHRC1Q96CG8 243 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 C11orf24Q96F05 449 aaPredicted RBP17.16■□□□□ 0.34
SPIDR-220ENST00000522900 DOHHQ9BU89 302 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 EBPLQ9BY08 206 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 ITPAQ9BY32 194 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 LDAHQ9H6V9 325 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 ZNF703Q9H7S9 590 aaPredicted RBP17.16■□□□□ 0.34
SPIDR-220ENST00000522900 ANKRA2Q9H9E1 313 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 SPRR3Q9UBC9 169 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 BOKQ9UMX3 212 aaPredicted RBP17.16■□□□□ 0.34
SPIDR-220ENST00000522900 ZNF780BQ9Y6R6 833 aa17.16■□□□□ 0.34
SPIDR-220ENST00000522900 TRGV5A0A0B4J1U4 118 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 GNG14A0A1W2PPG7 69 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 SERTM1A2A2V5 107 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 OR14I1A6ND48 311 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 AQP7O14520 342 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 SUSD5O60279 629 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 NME6O75414 186 aaPredicted RBP17.15■□□□□ 0.34
SPIDR-220ENST00000522900 COX6B1P14854 86 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 PCSK2P16519 638 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 CRHR1P34998 444 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 NUP107P57740 925 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
SPIDR-220ENST00000522900 ACSM2AQ08AH3 577 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 RPS6KA2Q15349 733 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 PRSS53Q2L4Q9 553 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 ACSM2BQ68CK6 577 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 RTL6Q6ICC9 239 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 CCDC116Q8IYX3 515 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 OR52R1Q8NGF1 315 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 OR2W6PQ8NHA6 318 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 EXOSC8Q96B26 276 aaKnown RBP17.15■□□□□ 0.34
SPIDR-220ENST00000522900 CCDC126Q96EE4 140 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 SLC6A15Q9H2J7 730 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 COQ3Q9NZJ6 369 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 ACAD8Q9UKU7 415 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 GRID1Q9ULK0 1009 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 RNF6Q9Y252 685 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 PLLPQ9Y342 182 aa17.15■□□□□ 0.34
SPIDR-220ENST00000522900 ANKRD33BA6NCL7 494 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 TP53I11O14683 189 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 BCKDKO14874 412 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 HCN1O60741 890 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 ABCB1P08183 1280 aaPredicted RBP17.14■□□□□ 0.33
SPIDR-220ENST00000522900 DRD2P14416 443 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 CPA3P15088 417 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 KRT4P19013 534 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 ABCD3P28288 659 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 TIA1P31483 386 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPIDR-220ENST00000522900 CCT5P48643 541 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 TRPC1P48995 793 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 EMDP50402 254 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 NRG3P56975 720 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 DNAJB13P59910 316 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 CCDC153Q494R4 210 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 SPIN4Q56A73 249 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 FNDC7Q5VTL7 733 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 GALNT18Q6P9A2 607 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 FRMD7Q6ZUT3 714 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 ZNF295-AS1Q8N0V1 137 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 C4orf33Q8N1A6 199 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 C17orf47Q8NEP4 570 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 RND1Q92730 232 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 KAT2AQ92830 837 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 RILPQ96NA2 401 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 ANGPTL4Q9BY76 406 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 UCK2Q9BZX2 261 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 EXO5Q9H790 373 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 PFDN4Q9NQP4 134 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 RYDENQ9NUL5 291 aaKnown RBP17.14■□□□□ 0.33
SPIDR-220ENST00000522900 FAM215AQ9Y5M1 114 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 PCNX1Q96RV3 2341 aa17.14■□□□□ 0.33
SPIDR-220ENST00000522900 CCDC151A5D8V7 595 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 COPEO14579 308 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ANXA4P09525 319 aaPredicted RBP17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ACVR2AP27037 513 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 CASP3P42574 277 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 SLC18A2Q05940 514 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ZNF628Q5EBL2 1059 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 SPDYAQ5MJ70 313 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 TMEM198Q66K66 360 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 CNPY4Q8N129 248 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 CCDC63Q8NA47 563 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 NTNG2Q96CW9 530 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 GNRHR2Q96P88 292 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 TTYH2Q9BSA4 534 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 TRIM8Q9BZR9 551 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 RUBCNLQ9H714 662 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ACKR4Q9NPB9 350 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 OXSMQ9NWU1 459 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ALKBH4Q9NXW9 302 aa17.13■□□□□ 0.33
SPIDR-220ENST00000522900 ZNF407Q9C0G0 2248 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 TLDC2A0PJX2 215 aa17.12■□□□□ 0.33
SPIDR-220ENST00000522900 NKX2-6A6NCS4 301 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms