RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TLR4O00206 839 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 NTN3O00634 580 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FPGTO14772 594 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 VILLO15195 856 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RAD51BO15315 384 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 EIF3HO15372 352 aaKnown RBP eCLIP3.01□□□□□ -1.933e-7■■■■■ 37.8
VPS13B-209ENST00000521559 STX7O15400 261 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MAGEC1O60732 1142 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 WDR1O75083 606 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PTP4A3O75365 173 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SEC31AO94979 1220 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SCGB1D1O95968 90 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RETP07949 1114 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CYC1P08574 325 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 HOXC4P09017 264 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PIRTP0C851 137 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF182P17025 639 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 HNRNPA2B1P22626 353 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TEAD1P28347 426 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 HMGCLP35914 325 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PTGER3P43115 390 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MAGEA3P43357 314 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RABIFP47224 123 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FASLGP48023 281 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF140P52738 457 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CRIP2P52943 208 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PLTPP55058 493 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DCDC1P59894 354 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PFN3P60673 137 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TUBB4BP68371 445 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CAV1Q03135 178 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FOXM1Q08050 763 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CDH17Q12864 832 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 OVGP1Q12889 678 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM115Q12893 351 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 GAGE5Q13069 117 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 GAGE6Q13070 117 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FRG1Q14331 258 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PTPRCAPQ14761 206 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CHRNA6Q15825 494 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 LPAL2Q16609 132 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DUOXA1Q1HG43 343 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 C2orf68Q2NKX9 166 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 EIF2S3LQ2VIR3 472 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DNAJC21Q5F1R6 531 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FAM205BPQ63HN1 556 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SIGIRRQ6IA17 410 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 C8orf74Q6P047 294 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PNCKQ6P2M8 343 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM154Q6P9G4 183 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 Q6ZSR6 202 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF534Q76KX8 674 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MARK2Q7KZI7 788 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 NLRP9Q7RTR0 991 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 GLT6D1Q7Z4J2 308 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PXKQ7Z7A4 578 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ABI3BPQ7Z7G0 1075 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 IQCHQ86VS3 1027 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 HOOK3Q86VS8 718 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM219Q86XT9 240 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FOXRED2Q8IWF2 684 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 C1orf87Q8N0U7 546 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 WDSUB1Q8N9V3 476 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DNAAF3Q8N9W5 541 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 BLOC1S5Q8TDH9 187 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SGCDQ92629 289 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 KLK6Q92876 244 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PEX13Q92968 403 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ART4Q93070 314 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 INTS12Q96CB8 462 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 AP2M1Q96CW1 435 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 NUS1Q96E22 293 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DTD2Q96FN9 168 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SNF8Q96H20 258 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 CDKN2AIPNLQ96HQ2 116 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SERAC1Q96JX3 654 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 BMFQ96LC9 184 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 SERPINB12Q96P63 405 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 QRFPRQ96P65 431 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RANBP9Q96S59 729 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 APOOQ9BUR5 198 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RIOK2Q9BVS4 552 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 KIFC1Q9BW19 673 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ITPAQ9BY32 194 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FAM129AQ9BZQ8 928 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 IL22Q9GZX6 179 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ARRDC1-AS1Q9H2J1 176 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DPH5Q9H2P9 285 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 GHITMQ9H3K2 345 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MRM3Q9HC36 420 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TM9SF3Q9HD45 589 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 IL26Q9NPH9 171 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MBNL1Q9NR56 388 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 FAM114A2Q9NRY5 505 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 NLE1Q9NVX2 485 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 PKD2L2Q9NZM6 624 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 IL17CQ9P0M4 197 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 TAAR2Q9P1P5 351 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 NFKBIL1Q9UBC1 381 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 RALYQ9UKM9 306 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms