RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 NAGAP17050 411 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 KRT15P19012 456 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 CEACAM8P31997 349 aaPredicted RBP17.97■□□□□ 0.47
PABPC1-215ENST00000520804 TIMP3P35625 211 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 CDH13P55290 713 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 MGAT2Q10469 447 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 GALNT1Q10472 559 aaPredicted RBP17.97■□□□□ 0.47
PABPC1-215ENST00000520804 MAP4K2Q12851 820 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 WHAMMP3Q1A5X7 153 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 NHSL2Q5HYW2 709 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 VASNQ6EMK4 673 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 LETMD1Q6P1Q0 360 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 LACC1Q8IV20 430 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 ZZZ3Q8IYH5 903 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 PM20D2Q8IYS1 436 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 NAXEQ8NCW5 288 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 TNIP2Q8NFZ5 429 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 DCAKDQ8WVC6 231 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 SELENOMQ8WWX9 145 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 NRGNQ92686 78 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 FMO2Q99518 471 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 C1QTNF3Q9BXJ4 246 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 BRINP2Q9C0B6 783 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 BRF2Q9HAW0 419 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 MAT2BQ9NZL9 334 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 DMGDHQ9UI17 866 aaKnown RBP17.97■□□□□ 0.47
PABPC1-215ENST00000520804 ZNF180Q9UJW8 692 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 CFL2Q9Y281 166 aa17.97■□□□□ 0.47
PABPC1-215ENST00000520804 MED13LQ71F56 2210 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 A8MT66 165 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TRIM49D1C9J1S8 452 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 POC1B-GALNT4F8VUJ3 575 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 DVL2O14641 736 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 CDH16O75309 829 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 ERAL1O75616 437 aaKnown RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 PPM1BO75688 479 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 SBK3P0C264 359 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TSPAN8P19075 237 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 CSNK2A2P19784 350 aaPredicted RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 BMP5P22003 454 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 DEKP35659 375 aaKnown RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 FEN1P39748 380 aaKnown RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 PEX19P40855 299 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 KIR2DL3P43628 341 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 ART1P52961 327 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 WNT3P56703 355 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 SNTB1Q13884 538 aaKnown RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TIGD3Q6B0B8 471 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 FAM111BQ6SJ93 734 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 MMP21Q8N119 569 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TMEM151AQ8N4L1 468 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 MMGT1Q8N4V1 131 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 IFT81Q8WYA0 676 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TM4SF18Q96CE8 201 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 DNAJB12Q9NXW2 375 aaKnown RBP17.96■□□□□ 0.47
PABPC1-215ENST00000520804 TRPS1Q9UHF7 1281 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 BCAP29Q9UHQ4 241 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 ZNF639Q9UID6 485 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 SNX6Q9UNH7 406 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 SLC6A5Q9Y345 797 aa17.96■□□□□ 0.47
PABPC1-215ENST00000520804 PTPN6P29350 595 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 ECHS1P30084 290 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 UQCRC1P31930 480 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 SOX18P35713 384 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 ASCL1P50553 236 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 EXOSC7Q15024 291 aaKnown RBP17.95■□□□□ 0.46
PABPC1-215ENST00000520804 TOMM20Q15388 145 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 SF3B4Q15427 424 aaKnown RBP eCLIP17.95■□□□□ 0.46
PABPC1-215ENST00000520804 NNATQ16517 81 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 FBXL19-AS1Q494R0 122 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 EIPR1Q53HC9 387 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 TMEM81Q6P7N7 255 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 POMZP3Q6PJE2 187 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 NUP54Q7Z3B4 507 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 NOA1Q8NC60 698 aaKnown RBP17.95■□□□□ 0.46
PABPC1-215ENST00000520804 RNASE6Q93091 150 aaKnown RBP17.95■□□□□ 0.46
PABPC1-215ENST00000520804 SH3GL2Q99962 352 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 ITPAQ9BY32 194 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 METTL7AQ9H8H3 244 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 NMRK1Q9NWW6 199 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 ZNF629Q9UEG4 869 aaPredicted RBP17.95■□□□□ 0.46
PABPC1-215ENST00000520804 ZNF225Q9UK10 706 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 PSME2Q9UL46 239 aa17.95■□□□□ 0.46
PABPC1-215ENST00000520804 GNB5O14775 395 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 IL2RAP01589 272 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 BMP7P18075 431 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 DUSP2Q05923 314 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 WIPI1Q5MNZ9 446 aaPredicted RBP17.94■□□□□ 0.46
PABPC1-215ENST00000520804 FAM219BQ5XKK7 198 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 NSUN5P2Q63ZY6 315 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 DESI1Q6ICB0 168 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 C1orf52Q8N6N3 182 aaKnown RBP17.94■□□□□ 0.46
PABPC1-215ENST00000520804 SIMC1Q8NDZ2 872 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 ADCY4Q8NFM4 1077 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 OR1J4Q8NGS1 313 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 UHMK1Q8TAS1 419 aaKnown RBP17.94■□□□□ 0.46
PABPC1-215ENST00000520804 HGDQ93099 445 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 CTHRC1Q96CG8 243 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 KLHL29Q96CT2 875 aa17.94■□□□□ 0.46
PABPC1-215ENST00000520804 OMA1Q96E52 524 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms