RNA–Protein interactions for RNA: ENST00000519276.1

UBLCP1-202, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 1,558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-202ENST00000519276 CBX3Q13185 183 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 FAM219BQ5XKK7 198 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 LUZP1Q86V48 1076 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 SNX32Q86XE0 403 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 BIRC7Q96CA5 298 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 DTD2Q96FN9 168 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 FAM173AQ9BQD7 235 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 CARD9Q9H257 536 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 RNF41Q9H4P4 317 aaPredicted RBP3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 HPS4Q9NQG7 708 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 RAI14Q9P0K7 980 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 RCOR3Q9P2K3 495 aaPredicted RBP3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 NAALAD2Q9Y3Q0 740 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
UBLCP1-202ENST00000519276 IGLV3-10A0A075B6K4 115 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 TRAV9-2A0A087WT02 112 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 A0A1W2PQ72 361 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CCDC69A6NI79 296 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 K7ERI5 159 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 P4HA1P13674 534 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 SAA4P35542 130 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 TRIM23P36406 574 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 HNRNPFP52597 415 aaKnown RBP3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 GFPT1Q06210 699 aaPredicted RBP3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 RUNX3Q13761 415 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CRMP1Q14194 572 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CD226Q15762 336 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CLPPQ16740 277 aaPredicted RBP3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CNPY1Q3B7I2 92 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CWC27Q6UX04 472 aaKnown RBP3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 APOOLQ6UXV4 268 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 SLC22A18ASQ8N1D0 253 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 CRYGNQ8WXF5 182 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 TMEM37Q8WXS4 190 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 TRIM9Q9C026 710 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 ABCG4Q9H172 646 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 NRN1Q9NPD7 142 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 HOMER3Q9NSC5 361 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 STARD5Q9NSY2 213 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 FAM153AQ9UHL3 310 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 KLHDC2Q9Y2U9 406 aa3.21□□□□□ -1.89
UBLCP1-202ENST00000519276 RALGAPA1Q6GYQ0 2036 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 ZNF646O15015 1829 aaPredicted RBP3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 SLC9B1P1A6NJY1 282 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 EI24O14681 340 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 LRRTM2O43300 516 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 TYROBPO43914 113 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 HSF2BPO75031 334 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 SYNGR4O95473 234 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 ARHGDIAP52565 204 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 UBXN1Q04323 297 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 TIMM50Q3ZCQ8 353 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 UTF1Q5T230 341 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 ETFRF1Q6IPR1 90 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 ATRAIDQ6UW56 229 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 YRDCQ86U90 279 aaKnown RBP3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 RANBP3LQ86VV4 465 aaPredicted RBP3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 FBXL16Q8N461 479 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 MCCC1Q96RQ3 725 aaPredicted RBP3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 CBWD1Q9BRT8 395 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 ACAT2Q9BWD1 397 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 IKZF3Q9UKT9 509 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 KNSTRNQ9Y448 316 aa3.21□□□□□ -1.9
UBLCP1-202ENST00000519276 SPAG9O60271 1321 aaKnown RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ZMYM6O95789 1325 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ZSCAN5CA6NGD5 496 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 LRP3O75074 770 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ECDO95905 644 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 IGKV3-15P01624 115 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 IGHV3-9P01782 118 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 GSTA1P08263 222 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ACP1P24666 158 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 MARCKSP29966 332 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 NPY2RP49146 381 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 CCL11P51671 97 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 VCPP55072 806 aaKnown RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 CMPK2Q5EBM0 449 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 TCHHL1Q5QJ38 904 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ACER2Q5QJU3 275 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 RABEPKQ7Z6M1 372 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 LEMD2Q8NC56 503 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 TMEM185AQ8NFB2 350 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 EXOC6Q8TAG9 804 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 RANBP9Q96S59 729 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 DDX47Q9H0S4 455 aaKnown RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 RSPH9Q9H1X1 276 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 FAM124BQ9H5Z6 455 aaPredicted RBP3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 IMPAD1Q9NX62 359 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 LHX3Q9UBR4 397 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 COPS7AQ9UBW8 275 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 KCNN3Q9UGI6 736 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 SLC9A8Q9Y2E8 581 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ZNF175Q9Y473 711 aa3.2□□□□□ -1.9
UBLCP1-202ENST00000519276 ABCC9O60706 1549 aa3.19□□□□□ -1.9
UBLCP1-202ENST00000519276 PDLIM1O00151 329 aa3.19□□□□□ -1.9
UBLCP1-202ENST00000519276 BUB1O43683 1085 aa3.19□□□□□ -1.9
UBLCP1-202ENST00000519276 PRAMEF12O95522 483 aa3.19□□□□□ -1.9
UBLCP1-202ENST00000519276 PGK2P07205 417 aa3.19□□□□□ -1.9
UBLCP1-202ENST00000519276 HOXB7P09629 217 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms