RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SCAMP2O15127 329 aaKnown RBP20.33■□□□□ 0.85
VEGFA-217ENST00000518538 PDPK1O15530 556 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 PLOD3O60568 738 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 KITP10721 976 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 GPX3P22352 226 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 PTGR1Q14914 329 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 MAPKAPK3Q16644 382 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 ZNF385BQ569K4 471 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 IL20RBQ6UXL0 311 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 GALNTL5Q7Z4T8 443 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 SIMC1Q8NDZ2 872 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 LRRC8CQ8TDW0 803 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 DYDC1Q8WWB3 177 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 AMDHD1Q96NU7 426 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 TAAR6Q96RI8 345 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 INTS9Q9NV88 658 aaKnown RBP20.33■□□□□ 0.85
VEGFA-217ENST00000518538 PRODH2Q9UF12 536 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 ATP6V1HQ9UI12 483 aa20.33■□□□□ 0.85
VEGFA-217ENST00000518538 KLF13Q9Y2Y9 288 aaPredicted RBP20.33■□□□□ 0.85
VEGFA-217ENST00000518538 TRPC5OSA6NMA1 111 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 PYCARD-AS1I3L0S3 204 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 G6PDP11413 515 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 PRPS1L1P21108 318 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 NR0B1P51843 470 aaKnown RBP20.32■□□□□ 0.84
VEGFA-217ENST00000518538 LYPD8Q6UX82 237 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 LARP4Q71RC2 724 aaKnown RBP eCLIP20.32■□□□□ 0.841e-25■□□□□ 10.3
VEGFA-217ENST00000518538 WDR75Q8IWA0 830 aaKnown RBP20.32■□□□□ 0.84
VEGFA-217ENST00000518538 DND1Q8IYX4 353 aaKnown RBP20.32■□□□□ 0.84
VEGFA-217ENST00000518538 TAGAPQ8N103 731 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 BCORP1Q8N888 145 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 OR7G2Q8NG99 324 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 FAR1Q8WVX9 515 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 SGCZQ96LD1 299 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 C7orf26Q96N11 449 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 TIMMDC1Q9NPL8 285 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 DTX4Q9Y2E6 619 aa20.32■□□□□ 0.84
VEGFA-217ENST00000518538 CROCCQ5TZA2 2017 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 A0A087WV62 115 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 PLOD2O00469 737 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 SDHDO14521 159 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 LBPP18428 481 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 FRKP42685 505 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 EMDP50402 254 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 C21orf58P58505 322 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ZNF791Q3KP31 576 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 FHL5Q5TD97 284 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 OGFOD2Q6N063 350 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 RTL4Q6ZR62 310 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 MDGA2Q7Z553 956 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ATCAYQ86WG3 371 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 GOLM1Q8NBJ4 401 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 FAM98AQ8NCA5 519 aaKnown RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 GALNT11Q8NCW6 608 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 PSD4Q8NDX1 1056 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 DNAJB8Q8NHS0 232 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ZFP28Q8NHY6 868 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 PIWIL2Q8TC59 973 aaKnown RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 CIDECQ96AQ7 238 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 SPACA9Q96E40 222 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ZBED6CLQ96FA7 236 aaPredicted RBP20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ITPAQ9BY32 194 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ANKRA2Q9H9E1 313 aa20.31■□□□□ 0.84
VEGFA-217ENST00000518538 ASPDHA6ND91 283 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 CRYABP02511 175 aaKnown RBP20.3■□□□□ 0.84
VEGFA-217ENST00000518538 IFI6P09912 130 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 FBXO45P0C2W1 286 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 MC3RP41968 323 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 CLDN8P56748 225 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 ZNF324BQ6AW86 544 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-217ENST00000518538 TMEM107Q6UX40 140 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 RIMKLAQ8IXN7 391 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 OR7A2PQ8NGA2 310 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 ACSS1Q9NUB1 689 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-217ENST00000518538 VPS4AQ9UN37 437 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 MAPRE3Q9UPY8 281 aa20.3■□□□□ 0.84
VEGFA-217ENST00000518538 COQ9O75208 318 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 WISP1O95388 367 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 DIO3P55073 304 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 NRG3P56975 720 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 DCAF7P61962 342 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 PMP22Q01453 160 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 HSPB3Q12988 150 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 ZNF551Q7Z340 670 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-217ENST00000518538 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-217ENST00000518538 OR2L13Q8N349 312 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 KRTCAP2Q8N6L1 136 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 ELP4Q96EB1 424 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 FRMD6Q96NE9 622 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 PRPF18Q99633 342 aaKnown RBP20.29■□□□□ 0.84
VEGFA-217ENST00000518538 NXF5Q9H1B4 397 aaKnown RBP20.29■□□□□ 0.84
VEGFA-217ENST00000518538 OLAHQ9NV23 265 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 ATAD3AQ9NVI7 634 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 TAS2R9Q9NYW1 312 aa20.29■□□□□ 0.84
VEGFA-217ENST00000518538 C19orf53Q9UNZ5 99 aaPredicted RBP20.29■□□□□ 0.84
VEGFA-217ENST00000518538 CAPN14A8MX76 684 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 TCP11X1B4DZS4 312 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 KLRC4-KLRK1H3BQV0 150 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 DRD5P21918 477 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 EPHA3P29320 983 aa20.28■□□□□ 0.84
VEGFA-217ENST00000518538 PPICP45877 212 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms