RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 C14orf28Q4W4Y0 310 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 RBM48Q5RL73 367 aaKnown RBP14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FAM111BQ6SJ93 734 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 SLC5A8Q8N695 610 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 TTC29Q8NA56 475 aaPredicted RBP14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 OR10G2Q8NGC3 310 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 HDAC2Q92769 488 aaKnown RBP14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 DNAAF2Q9NVR5 837 aaKnown RBP14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 KCND3Q9UK17 655 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 TMEM131Q92545 1883 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 ABCA7Q8IZY2 2146 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 A0A0G2JPF8 293 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 HNRNPCL2B2RXH8 293 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 HNRNPCL3B7ZW38 293 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FAM227AF5H4B4 570 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FFAR1O14842 300 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 B4GAT1O43505 415 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FGF17O60258 216 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 HNRNPCL4P0DMR1 293 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 IL7RP16871 459 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FUT4P22083 530 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 SOX18P35713 384 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 GANABQ14697 944 aaKnown RBP14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 C6orf141Q5SZD1 244 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 PRAMEF8Q5VWM4 474 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 PRAMEF7Q5VXH5 474 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 LAIR2Q6ISS4 152 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 OR2L13Q8N349 312 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 ADAMTS16Q8TE57 1224 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 FBLIM1Q8WUP2 373 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 MS4A4EQ96PG1 132 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 SPATA5L1Q9BVQ7 753 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 BTBD2Q9BX70 525 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 ANKHQ9HCJ1 492 aa14.49□□□□□ -0.09
THUMPD3-210ENST00000515662 E9PQ18 207 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 SRPX2O60687 465 aaPredicted RBP14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 LDB3O75112 727 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 NME6O75414 186 aaPredicted RBP14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 RDH16O75452 317 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GADD45GO95257 159 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 EPHA2P29317 976 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GPAT3Q53EU6 434 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 ZNF628Q5EBL2 1059 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 WDR45BQ5MNZ6 344 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 MFSD12Q6NUT3 480 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 COMTD1Q86VU5 262 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 OR4D11Q8NGI4 311 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 OR9A4Q8NGU2 314 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 TANKQ92844 425 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GABARAPL3Q9BY60 117 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 RLIMQ9NVW2 624 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 PTGFRNQ9P2B2 879 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 RHCGQ9UBD6 479 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 NDRG4Q9ULP0 352 aaKnown RBP14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 LIPT1Q9Y234 373 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 PCDH17O14917 1159 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 SEMA7AO75326 666 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GPR75O95800 540 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 CRHBPP24387 322 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 RAB38P57729 211 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 NPRL3Q12980 569 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 TCTN3Q6NUS6 607 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 SIMC1Q8NDZ2 872 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 SETD9Q8NE22 299 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 TGM7Q96PF1 710 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 WFDC6Q9BQY6 131 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 ADNPQ9H2P0 1102 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GIN1Q9NXP7 522 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 GMPPBQ9Y5P6 360 aa14.48□□□□□ -0.09
THUMPD3-210ENST00000515662 A8MVJ9 347 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 ATP1B1P05026 303 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 ANXA8P13928 327 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 GFERP55789 205 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 IL5RAQ01344 420 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 MLLT1Q03111 559 aaPredicted RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 FHL5Q5TD97 284 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 BORAQ6PGQ7 559 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 WDR53Q7Z5U6 358 aaPredicted RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 RBM45Q8IUH3 476 aaKnown RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 LACC1Q8IV20 430 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 VANGL1Q8TAA9 524 aaPredicted RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 PHF10Q8WUB8 498 aaKnown RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 SLC35A4Q96G79 324 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 TRNT1Q96Q11 434 aaKnown RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 PSD2Q9BQI7 771 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 IER2Q9BTL4 223 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 MUTYHQ9UIF7 546 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 RNF215Q9Y6U7 377 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 RHPN2P1A8MT19 583 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 MED26O95402 600 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 CDK4P11802 303 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 GABRA4P48169 554 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 PPM1FP49593 454 aaPredicted RBP14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 FAM214AQ32MH5 1076 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 COLEC12Q5KU26 742 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 ATAD3BQ5T9A4 648 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 CDC73Q6P1J9 531 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 HMGN2P46Q86SG4 172 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 SLC16A11Q8NCK7 471 aa14.47□□□□□ -0.09
THUMPD3-210ENST00000515662 ADAMTS15Q8TE58 950 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms