RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CNRIP1Q96F85 164 aaPredicted RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF597Q96LX8 424 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 KCNA7Q96RP8 456 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 DOHHQ9BU89 302 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ITPAQ9BY32 194 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 BRINP2Q9C0B6 783 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 NXF5Q9H1B4 397 aaKnown RBP9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 LDAHQ9H6V9 325 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 ACKR4Q9NPB9 350 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TNFRSF10DQ9UBN6 386 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 HEY2Q9UBP5 337 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 B4GALT7Q9UBV7 327 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 TBK1Q9UHD2 729 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 DCDC2Q9UHG0 476 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 PSME2Q9UL46 239 aa9.6□□□□□ -0.87
HMGXB3-205ENST00000514469 A0A1W2PPM1 405 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 G3V2L1 256 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 UBFD1O14562 309 aaKnown RBP9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PCDH7O60245 1069 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 WDR1O75083 606 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PROCP04070 461 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 SHBGP04278 402 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 IL3P08700 152 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ABCD3P28288 659 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 TIA1P31483 386 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 DEKP35659 375 aaKnown RBP9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ALDH9A1P49189 494 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 HMGCS1Q01581 520 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PMPCAQ10713 525 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 EXOSC7Q15024 291 aaKnown RBP9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 LTB4RQ15722 352 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF628Q5EBL2 1059 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 WLSQ5T9L3 541 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 FNDC7Q5VTL7 733 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 BICRALQ6AI39 1079 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 FAM180BQ6P0A1 224 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF585AQ6P3V2 769 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 TMEM81Q6P7N7 255 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 GALNT18Q6P9A2 607 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 FAM111BQ6SJ93 734 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ZYG11AQ6WRX3 759 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 B3GNT6Q6ZMB0 384 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 TDRPQ86YL5 185 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PRR22Q8IZ63 422 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 SIMC1Q8NDZ2 872 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 LILRB4Q8NHJ6 448 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 NEIL3Q8TAT5 605 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ZNF675Q8TD23 568 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 CCDC126Q96EE4 140 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 APIPQ96GX9 242 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 LURAP1Q96LR2 239 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 JSRP1Q96MG2 331 aaPredicted RBP9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 RILPQ96NA2 401 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 TTYH2Q9BSA4 534 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ANGPTL4Q9BY76 406 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 UBQLN3Q9H347 655 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PPCSQ9HAB8 311 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 SIRT5Q9NXA8 310 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 UTS2RQ9UKP6 389 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 ACAD8Q9UKU7 415 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 CFL2Q9Y281 166 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 PCDHGB3Q9Y5G1 929 aa9.59□□□□□ -0.87
HMGXB3-205ENST00000514469 CCDC151A5D8V7 595 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 NKX2-6A6NCS4 301 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 FAM90A27PA6NNH2 459 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 FOXO6A8MYZ6 492 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ACOX3O15254 700 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 PLIN3O60664 434 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 PPM1BO75688 479 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TOXO94900 526 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 SNX4O95219 450 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 HPNP05981 417 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 GLI4P10075 376 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 MYL2P10916 166 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 DRD2P14416 443 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 PCSK2P16519 638 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 NAGAP17050 411 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 GDF1P27539 372 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 MSX1P28360 303 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 SSTR2P30874 369 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 CASP3P42574 277 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 GSTM5P46439 218 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 EMDP50402 254 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 FOXA1P55317 472 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 NAA20P61599 178 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 DCAF7P61962 342 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 RPP38P78345 283 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 MRPS35P82673 323 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ACSM2AQ08AH3 577 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 CEBPEQ15744 281 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 NNATQ16517 81 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 CCDC153Q494R4 210 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TRMT12Q53H54 448 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 C1orf185Q5T7R7 199 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 TMEM198Q66K66 360 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 ACSM2BQ68CK6 577 aa9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 MEX3BQ6ZN04 569 aaKnown RBP9.58□□□□□ -0.88
HMGXB3-205ENST00000514469 FRMD7Q6ZUT3 714 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms