RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CNPY1Q3B7I2 92 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 ZNF628Q5EBL2 1059 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 WDR45BQ5MNZ6 344 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 LAIR2Q6ISS4 152 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 MFSD12Q6NUT3 480 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 MAMSTRQ6ZN01 415 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 RBM44Q6ZP01 1051 aaKnown RBP14.02□□□□□ -0.16
VCAN-211ENST00000513984 OR4N5Q8IXE1 308 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 SLC5A8Q8N695 610 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 TMEM52Q8NDY8 209 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 OR52J3Q8NH60 311 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 TANKQ92844 425 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 DGCR14Q96DF8 476 aaKnown RBP14.02□□□□□ -0.16
VCAN-211ENST00000513984 DHRS1Q96LJ7 313 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 ZNF285Q96NJ3 590 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 TRNT1Q96Q11 434 aaKnown RBP14.02□□□□□ -0.16
VCAN-211ENST00000513984 RAB33BQ9H082 229 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 ANKHQ9HCJ1 492 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 EQTNQ9NQ60 294 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 UCKL1Q9NWZ5 548 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 CALML5Q9NZT1 146 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 ACAD8Q9UKU7 415 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 KCNE3Q9Y6H6 103 aa14.02□□□□□ -0.16
VCAN-211ENST00000513984 PI4KAP42356 2102 aa14.02□□□□□ -0.17
VCAN-211ENST00000513984 TLCD2A6NGC4 264 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 DUXAA6NLW8 204 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 SGK494L7N484 410 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 FFAR1O14842 300 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 FGF17O60258 216 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 SDC3O75056 442 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 GPR75O95800 540 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 CTSBP07858 339 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 CYP4B1P13584 511 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 GABRA4P48169 554 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 GABARAPL2P60520 117 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 GANABQ14697 944 aaKnown RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 GPAT3Q53EU6 434 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 COLEC12Q5KU26 742 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 FHL5Q5TD97 284 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 HEPHL1Q6MZM0 1159 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 TCTN3Q6NUS6 607 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 CDC73Q6P1J9 531 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 ZNF566Q969W8 418 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 COL26A1Q96A83 441 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 CHRNA10Q9GZZ6 450 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 SLC38A1Q9H2H9 487 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 GIN1Q9NXP7 522 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 EPHA6Q9UF33 1036 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 POFUT2Q9Y2G5 429 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 GMPPBQ9Y5P6 360 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 ARID1BQ8NFD5 2236 aaPredicted RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 A0A087WV62 115 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 PCDH17O14917 1159 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 CASC3O15234 703 aaKnown RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 LDB3O75112 727 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 SEMA7AO75326 666 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 RDH16O75452 317 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 AGR2O95994 175 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 EPHA2P29317 976 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 C6orf132Q5T0Z8 1188 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 ATAD3BQ5T9A4 648 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 ZNF773Q6PK81 442 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 FAM92BQ6ZTR7 304 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 OLIG3Q7RTU3 272 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 TSPYL5Q86VY4 417 aaPredicted RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 SHISA5Q8N114 240 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 OR4D11Q8NGI4 311 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 PHF10Q8WUB8 498 aaKnown RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 HRASLS5Q96KN8 279 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 APOL4Q9BPW4 351 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 PAPOLBQ9NRJ5 636 aaKnown RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 RLIMQ9NVW2 624 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 C19orf53Q9UNZ5 99 aaPredicted RBP14.01□□□□□ -0.17
VCAN-211ENST00000513984 HCN4Q9Y3Q4 1203 aa14.01□□□□□ -0.17
VCAN-211ENST00000513984 B4GAT1O43505 415 aa14□□□□□ -0.17
VCAN-211ENST00000513984 KIF1CO43896 1103 aaKnown RBP14□□□□□ -0.17
VCAN-211ENST00000513984 CCNB2O95067 398 aa14□□□□□ -0.17
VCAN-211ENST00000513984 EPPINO95925 133 aa14□□□□□ -0.17
VCAN-211ENST00000513984 CCDC159P0C7I6 412 aa14□□□□□ -0.17
VCAN-211ENST00000513984 FUT4P22083 530 aa14□□□□□ -0.17
VCAN-211ENST00000513984 HOXA6P31267 233 aa14□□□□□ -0.17
VCAN-211ENST00000513984 GFERP55789 205 aa14□□□□□ -0.17
VCAN-211ENST00000513984 SKP1P63208 163 aa14□□□□□ -0.17
VCAN-211ENST00000513984 IL5RAQ01344 420 aa14□□□□□ -0.17
VCAN-211ENST00000513984 CDK5R2Q13319 367 aa14□□□□□ -0.17
VCAN-211ENST00000513984 FAM214AQ32MH5 1076 aa14□□□□□ -0.17
VCAN-211ENST00000513984 EXOSC6Q5RKV6 272 aaKnown RBP14□□□□□ -0.17
VCAN-211ENST00000513984 NIPAL1Q6NVV3 410 aa14□□□□□ -0.17
VCAN-211ENST00000513984 COMTD1Q86VU5 262 aa14□□□□□ -0.17
VCAN-211ENST00000513984 LACC1Q8IV20 430 aa14□□□□□ -0.17
VCAN-211ENST00000513984 OR9A4Q8NGU2 314 aa14□□□□□ -0.17
VCAN-211ENST00000513984 ZNF675Q8TD23 568 aa14□□□□□ -0.17
VCAN-211ENST00000513984 ADAMTS15Q8TE58 950 aa14□□□□□ -0.17
VCAN-211ENST00000513984 NCSTNQ92542 709 aa14□□□□□ -0.17
VCAN-211ENST00000513984 SLC35A4Q96G79 324 aa14□□□□□ -0.17
VCAN-211ENST00000513984 ALPK1Q96QP1 1244 aa14□□□□□ -0.17
VCAN-211ENST00000513984 CD180Q99467 661 aa14□□□□□ -0.17
VCAN-211ENST00000513984 PINK1Q9BXM7 581 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms