RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NR2F1P10589 423 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ANXA8P13928 327 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 IGFBP5P24593 272 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 RRM2P31350 389 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 HOXD12P35452 270 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 SOX18P35713 384 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MAP3K8P41279 467 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MC3RP41968 323 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 GCGRP47871 477 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 FNTBP49356 437 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ARRB1P49407 418 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 DAPP51397 102 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 NR1H2P55055 460 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 SMIM11AP58511 58 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 RPS26P62854 115 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 SIM1P81133 766 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 BNC1Q01954 994 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MGAT2Q10469 447 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 FUT5Q11128 374 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MAP4K2Q12851 820 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 KCNAB2Q13303 367 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 TOP3AQ13472 1001 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 PUM1Q14671 1186 aaKnown RBP eCLIP7.85□□□□□ -1.15
RNF4-220ENST00000513578 LASP1Q14847 261 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 SYPL1Q16563 259 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 DUSP7Q16829 419 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PRICKLE4Q2TBC4 344 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ZNF750Q32MQ0 723 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 RBM48Q5RL73 367 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 MFSD12Q6NUT3 480 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 WDR74Q6RFH5 385 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 TMEM107Q6UX40 140 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 DGLUCYQ7Z3D6 616 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PRSS42Q7Z5A4 293 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 THAP5Q7Z6K1 395 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PLXDC1Q8IUK5 500 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ZNF595Q8IYB9 648 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 HS3ST5Q8IZT8 346 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 C8orf59Q8N0T1 100 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 OR7G2Q8NG99 324 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 GPR32P1Q8NGA4 272 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 GIPC3Q8TF64 312 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 XAGE5Q8WWM1 108 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 CYGBQ8WWM9 190 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PROX1Q92786 737 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 EDAQ92838 391 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ANKRD9Q96BM1 317 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 CTHRC1Q96CG8 243 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MVB12AQ96EY5 273 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ZC3H10Q96K80 434 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 STACQ99469 402 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PITX2Q99697 317 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PIP5K1AQ99755 562 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PINK1Q9BXM7 581 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 GABARAPL3Q9BY60 117 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 AMBRA1Q9C0C7 1298 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PIGUQ9H490 435 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 RUBCNLQ9H714 662 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 EVA1AQ9H8M9 152 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 ACER3Q9NUN7 267 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 DDX18Q9NVP1 670 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 NLGN3Q9NZ94 848 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PDP1Q9P0J1 537 aaPredicted RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 LRIT1Q9P2V4 623 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 TRPC4Q9UBN4 977 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 PILRBQ9UKJ0 227 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 SATB2Q9UPW6 733 aa7.85□□□□□ -1.15
RNF4-220ENST00000513578 MRPS33Q9Y291 106 aaKnown RBP7.85□□□□□ -1.15
RNF4-220ENST00000513578 XIRP2A4UGR9 3374 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 A0A087WXM4 84 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 A0A1B0GTQ1 180 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 A0A1W2PS29 197 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 HYKKA2RU49 373 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 TTC36A6NLP5 189 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 B4GAT1O43505 415 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 CHST10O43529 356 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 DUX1O43812 170 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FGF17O60258 216 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 CTNSO60931 367 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 OXSR1O95747 527 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 LGI1O95970 557 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 CLPTM1O96005 669 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 AK1P00568 194 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 LINGO3P0C6S8 592 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 RNH1P13489 461 aaKnown RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 PRKACGP22612 351 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 EPHA8P29322 1005 aaPredicted RBP7.84□□□□□ -1.15
RNF4-220ENST00000513578 CNR2P34972 360 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 AVPR1BP47901 424 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ALDH3B2P48448 385 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ISL1P61371 349 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 SHC2P98077 582 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 BNIP3Q12983 259 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 GRM7Q14831 915 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 MICAQ29983 383 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 FAM214AQ32MH5 1076 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 ARHGAP11BQ3KRB8 267 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 LIN52Q52LA3 116 aa7.84□□□□□ -1.15
RNF4-220ENST00000513578 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms