RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CYP3A5P20815 502 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 CMA1P23946 247 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 CTNNA2P26232 953 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ANXA13P27216 316 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 KCNJ1P48048 391 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SLC6A12P48065 614 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 NR0B1P51843 470 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 NDUFA8P51970 172 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ZNF131P52739 623 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TNNC1P63316 161 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 NUCB2P80303 420 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 PLD1Q13393 1074 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 KBTBD12Q3ZCT8 623 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ZRANB3Q5FWF4 1079 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 XKR6Q5GH73 641 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 XKR4Q5GH76 650 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GFI1BQ5VTD9 330 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SDHAF4Q5VUM1 108 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 RESP18Q5W5W9 173 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TPGS2Q68CL5 300 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 SLC39A4Q6P5W5 647 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 IYDQ6PHW0 289 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 CD300LGQ6UXG3 332 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 LINC00696Q6ZRV3 163 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 Q6ZSR9 355 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 RAPH1Q70E73 1250 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 PTAR1Q7Z6K3 402 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 ZNF329Q86UD4 541 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ITIH5Q86UX2 942 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 CCDC185Q8N715 623 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 OR7G3Q8NG95 312 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 OR1L3Q8NH93 324 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 OR2T6Q8NHC8 308 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 OCC1Q8TAD7 63 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SMAP2Q8WU79 429 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 FGF13Q92913 245 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ZNF707Q96C28 371 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 ZNF501Q96CX3 271 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 TCEAL4Q96EI5 215 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 HPDLQ96IR7 371 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ZNF560Q96MR9 790 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TSPAN18Q96SJ8 248 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 NDNQ99608 321 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GPATCH1Q9BRR8 931 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 ALKBH7Q9BT30 221 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 RPP25Q9BUL9 199 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 FUT8Q9BYC5 575 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 FGFBP2Q9BYJ0 223 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TRIM9Q9C026 710 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TRIM7Q9C029 511 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SLC5A7Q9GZV3 580 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SHARPINQ9H0F6 387 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TNMDQ9H2S6 317 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SRD5A3Q9H8P0 318 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 AKIRIN1Q9H9L7 192 aaPredicted RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 LMAN1LQ9HAT1 526 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 ZFP14Q9HCL3 533 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 SCRT2Q9NQ03 307 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 HOOK1Q9UJC3 728 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 NDRG2Q9UN36 371 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 PPP2R2CQ9Y2T4 447 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 GBF1Q92538 1859 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 TCF20Q9UGU0 1960 aaKnown RBP3.7□□□□□ -1.82
HTT-210ENST00000512909 CENPFP49454 3210 aa3.7□□□□□ -1.82
HTT-210ENST00000512909 MYH9P35579 1960 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 A0A087WUV0 522 aaPredicted RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 TRBV4-1A0A0J9YWV2 114 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 TRBV5-5A0A0J9YX44 114 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MEIOCA2RUB1 952 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 KRTAP29-1A8MX34 341 aaPredicted RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 A8MXQ7 604 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 PIRO00625 290 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 PI15O43692 258 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 CYTIPO60759 359 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 N4BP1O75113 896 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 SMC2O95347 1197 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 PIGRP01833 764 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 AMBPP02760 352 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 DCNP07585 359 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 PATE4P0C8F1 98 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 GP1BBP13224 206 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 F3P13726 295 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 CEBPBP17676 345 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 TYMPP19971 482 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 CYP2F1P24903 491 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 GABRR2P28476 465 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 HLA-FP30511 346 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 ADSSP30520 456 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 GDI1P31150 447 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 NKX2-1P43699 371 aaPredicted RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 IER3P46695 156 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 VCPP55072 806 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 CLDN15P56746 228 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MYL6P60660 151 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 RPL10AP62906 217 aaKnown RBP3.69□□□□□ -1.82
HTT-210ENST00000512909 CDH18Q13634 790 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 MORF4L2Q15014 288 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 RPS6KA1Q15418 735 aa3.69□□□□□ -1.82
HTT-210ENST00000512909 ZBTB6Q15916 424 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms