RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZNF721Q8TF20 911 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 UBTD2Q8WUN7 234 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 SREK1Q8WXA9 508 aaKnown RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 ANP32BQ92688 251 aaKnown RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 ANKRD9Q96BM1 317 aaPredicted RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 REPS1Q96D71 796 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 SPACA9Q96E40 222 aaPredicted RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 LRRC46Q96FV0 321 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 FBXL20Q96IG2 436 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 TTYH2Q9BSA4 534 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 UCK2Q9BZX2 261 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 RPF2Q9H7B2 306 aaKnown RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 WDR41Q9HAD4 459 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 SMYD2Q9NRG4 433 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 PNPLA3Q9NST1 481 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 LYARQ9NX58 379 aaKnown RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 QPCTLQ9NXS2 382 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 TUBA8Q9NY65 449 aaPredicted RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 B4GALT7Q9UBV7 327 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 EDARQ9UNE0 448 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 TSC22D4Q9Y3Q8 395 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 ATG4BQ9Y4P1 393 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
USP46-208ENST00000512656 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.62□□□□□ -1.35
USP46-208ENST00000512656 FLNAP21333 2647 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 A0A087X1B8 175 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 TRGV5A0A0B4J1U4 118 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 OR6C76A6NM76 312 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 CXorf49A8MYA2 514 aaPredicted RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 RTCAO00442 366 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 TP53I11O14683 189 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 FGF17O60258 216 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 KLK8O60259 260 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 OR10H2O60403 315 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PRAMEF4O60810 478 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 SH3BGRLO75368 114 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ETHE1O95571 254 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 GPR75O95800 540 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PF4P02776 101 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 IGKV3-11P04433 115 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 GLI4P10075 376 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 CCL3P10147 92 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 EPORP19235 508 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 STX2P32856 288 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PIK3CGP48736 1102 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 DNASE1L1P49184 302 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RPP38P78345 283 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 TNFRSF17Q02223 184 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 FOXO1Q12778 655 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 DDX39BQ13838 428 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 MPP2Q14168 576 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 SF3B4Q15427 424 aaKnown RBP eCLIP6.61□□□□□ -1.35
USP46-208ENST00000512656 FAM83EQ2M2I3 478 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ZNF791Q3KP31 576 aaPredicted RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 KBTBD12Q3ZCT8 623 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 C1orf185Q5T7R7 199 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RIPPLY2Q5TAB7 128 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PRAMEF9Q5VWM5 478 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 CYP20A1Q6UW02 462 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RNF111Q6ZNA4 994 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ISCA2Q86U28 154 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 TMEM200AQ86VY9 491 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 CCDC25Q86WR0 208 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 FBXW8Q8N3Y1 598 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ZCCHC7Q8N3Z6 543 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 LIX1Q8N485 282 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RPRMLQ8N4K4 120 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 TEX9Q8N6V9 391 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PPM1NQ8N819 430 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ZNF321PQ8N8H1 164 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 HUS1BQ8NHY5 278 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RHEBL1Q8TAI7 183 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 PAQR8Q8TEZ7 354 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 GAL3ST4Q96RP7 486 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ATOH8Q96SQ7 321 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 CNPPD1Q9BV87 410 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 DPH5Q9H2P9 285 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 OR51B5Q9H339 312 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ACTR8Q9H981 624 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 GRPEL1Q9HAV7 217 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ACKR4Q9NPB9 350 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ALKBH4Q9NXW9 302 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 REV1Q9UBZ9 1251 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ACOT9Q9Y305 439 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 UTP11Q9Y3A2 253 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 TNPO3Q9Y5L0 923 aaKnown RBP6.61□□□□□ -1.35
USP46-208ENST00000512656 LIPGQ9Y5X9 500 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 NAV3Q8IVL0 2385 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 MED13LQ71F56 2210 aa6.61□□□□□ -1.35
USP46-208ENST00000512656 ACANP16112 2415 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 A0A0G2JNJ9 132 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 HSPB2A8KAH6 182 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 H0YIV9 168 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 UBXN8O00124 270 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 DVL2O14641 736 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 PROM1O43490 865 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 UGDHO60701 494 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms