RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 TMED9Q9BVK6 235 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 NLKQ9UBE8 527 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 NDRG2Q9UN36 371 aaKnown RBP8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 DIMT1Q9UNQ2 313 aaKnown RBP8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC30A4O14863 429 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 LALBAP00709 142 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 C8orf89P0DMQ9 161 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC35F1Q5T1Q4 408 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 ZNF697Q5TEC3 545 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 OR4F15Q8NGB8 312 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 ZG16BQ96DA0 208 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 ZBED6CLQ96FA7 236 aaPredicted RBP8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 GFM1Q96RP9 751 aaKnown RBP8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 FAM83CQ9BQN1 747 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 POLDIP3Q9BY77 421 aaKnown RBP8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 NDOR1Q9UHB4 597 aa8.74□□□□□ -1.01
LIMCH1-215ENST00000512632 C2orf92A0A1B0GVN3 265 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC35F4A4IF30 521 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ANTXRLA6NF34 631 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 HPGDSO60760 199 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CELP19835 753 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SMIM11AP58511 58 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SNRPD2P62316 118 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ASAH1Q13510 395 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CNIH2Q6PI25 160 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 FAM92BQ6ZTR7 304 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 C19orf18Q8NEA5 215 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MSLNLQ96KJ4 702 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC35G5Q96KT7 338 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ART5Q96L15 291 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ZSWIM3Q96MP5 696 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 C17orf62Q9BQA9 187 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MS4A8Q9BY19 250 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SAP130Q9H0E3 1048 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 TESQ9UGI8 421 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 FGF18O76093 207 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 YES1P07947 543 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 C6P13671 934 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ACADLP28330 430 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ATP6V1E1P36543 226 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MAPK9P45984 424 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 KIAA1161Q6NSJ0 714 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 KIF18BQ86Y91 864 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CADM2Q8N3J6 435 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 FBXO15Q8NCQ5 510 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 C16orf58Q96GQ5 468 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 AIF1LQ9BQI0 150 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ZCCHC2Q9C0B9 1178 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 GLIPR2Q9H4G4 154 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 EQTNQ9NQ60 294 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MAN2C1Q9NTJ4 1040 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 P2RX2Q9UBL9 471 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC9A8Q9Y2E8 581 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MYO10Q9HD67 2058 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ZNF106Q9H2Y7 1883 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ALPK3Q96L96 1907 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 A0A087WUU8 490 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 A0A1W2PS29 197 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SMLR1H3BR10 107 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SCO2O43819 266 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 LCMT2O60294 686 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SLC2A2P11168 524 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CPEP16870 476 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 AVPR1BP47901 424 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ST8SIA6P61647 398 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 PLK5Q496M5 336 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ZNF658BQ4V348 819 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CCDC116Q8IYX3 515 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 Q8N402 240 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SETD7Q8WTS6 366 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 NUS1Q96E22 293 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 COQ10AQ96MF6 247 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 DPH7Q9BTV6 452 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 NEUROD4Q9HD90 331 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 LHX9Q9NQ69 397 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 GSTK1Q9Y2Q3 226 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 KCNE3Q9Y6H6 103 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 FAM240BA0A1B0GVZ2 78 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 EPPINO95925 133 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 PRKCAP17252 672 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 LAG3P18627 525 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 PPP2R1BP30154 601 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 SSR2P43308 183 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 RPS5P46782 204 aaKnown RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 MTNR1AP48039 350 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 IL18Q14116 193 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 TATDN3Q17R31 274 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 ZNF791Q3KP31 576 aaPredicted RBP8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 RRM2BQ7LG56 351 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 CLDN22Q8N7P3 220 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 YIPF7Q8N8F6 280 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 GDPD1Q8N9F7 314 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 OR8D4Q8NGM9 314 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 BBS4Q96RK4 519 aa8.73□□□□□ -1.01
LIMCH1-215ENST00000512632 XKR8Q9H6D3 395 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms