RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 RLN3Q8WXF3 142 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 SNX18Q96RF0 628 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 PDZD7Q9H5P4 517 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 P4HTMQ9NXG6 502 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 POLHQ9Y253 713 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 UBIAD1Q9Y5Z9 338 aa8.53□□□□□ -1.04
VCAN-208ENST00000512590 FXYD6-FXYD2A0A087WZ82 144 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 ZNF732B4DXR9 585 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 CCL22O00626 93 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 TNFSF12O43508 249 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 B3GALNT1O75752 331 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 OR10J4P0C629 311 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 SMIM17P0DL12 118 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 TLE4Q04727 773 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 CRMP1Q14194 572 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 SUSD1Q6UWL2 747 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 PLEKHG7Q6ZR37 379 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 PLD5Q8N7P1 536 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 TMEM104Q8NE00 496 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 OR51T1Q8NGJ9 327 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 FAM46BQ96A09 425 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 PYCR2Q96C36 320 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.04
VCAN-208ENST00000512590 HOPXQ9BPY8 73 aaPredicted RBP8.52□□□□□ -1.04
VCAN-208ENST00000512590 FXYD6Q9H0Q3 95 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 HES4Q9HCC6 221 aa8.52□□□□□ -1.04
VCAN-208ENST00000512590 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 NRP2O60462 931 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 LEFTY1O75610 366 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ANXA8P13928 327 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 EDNRBP24530 442 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PDK3Q15120 406 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ZMAT1Q5H9K5 638 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 EXD3Q8N9H8 876 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 OR6Q1Q8NGQ2 317 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ZNF461Q8TAF7 563 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 C17orf50Q8WW18 174 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 MAFIPQ8WZ33 124 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ZIM3Q96PE6 472 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 SULT4A1Q9BR01 284 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 UNKLQ9H9P5 680 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 GRHL1Q9NZI5 618 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 Q9Y3F1 56 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 C2orf78A6NCI8 922 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 MT-ND2P03891 347 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 H1F0P07305 194 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 FUT4P22083 530 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 SOX2P48431 317 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 MEOX1P50221 254 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 GDF10P55107 478 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ADARB1P78563 741 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 RAB33AQ14088 237 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 IL17AQ16552 155 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 GPR149Q86SP6 731 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 FUKQ8N0W3 1084 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 FAM109AQ8N4B1 249 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 GJC3Q8NFK1 279 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 OR51Q1Q8NH59 317 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 TCF12Q99081 682 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 BTBD10Q9BSF8 475 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 RSRP1Q9BUV0 290 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 NARFLQ9H6Q4 476 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 DDX4Q9NQI0 724 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PEX16Q9Y5Y5 336 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 TNFSF15O95150 251 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 FRKP42685 505 aaPredicted RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 DEFA5Q01523 94 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ABHD18Q0P651 414 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 LRIT3Q3SXY7 679 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 CDNFQ49AH0 187 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 CCNJQ5T5M9 372 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 RBM12BQ8IXT5 1001 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 OR2T34Q8NGX1 318 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 NPRL2Q8WTW4 380 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 B3GNT5Q9BYG0 378 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 RIOX1Q9H6W3 641 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 COMMD3Q9UBI1 195 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 CACNG4Q9UBN1 327 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PADI1Q9ULC6 663 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 SLC45A1Q9Y2W3 748 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 TCAF1Q9Y4C2 921 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 H7BY64 318 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PRAMEF2O60811 474 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 GKN3PP0CG01 181 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 MAGEA6P43360 314 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 AFF3P51826 1226 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 PPP5CP53041 499 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 NR1H2P55055 460 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 LASP1Q14847 261 aaKnown RBP8.52□□□□□ -1.05
VCAN-208ENST00000512590 NXNL2Q5VZ03 156 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 LINC00471Q8N535 108 aa8.52□□□□□ -1.05
VCAN-208ENST00000512590 PRELID2Q8N945 189 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms