RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 HHLA1C9JL84 531 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 FFAR3O14843 346 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 GPR42O15529 346 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 CNOT3O75175 753 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 OR2J3O76001 311 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 TOX4O94842 621 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 PRNPP04156 253 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 BMP4P12644 408 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 SLC26A3P40879 764 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 LOXL3P58215 753 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 NFATC2Q13469 925 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 GRM7Q14831 915 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 CYP1B1Q16678 543 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 KLHL38Q2WGJ6 581 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 GGTA1PQ4G0N0 100 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 BEND3Q5T5X7 828 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 GPR107Q5VW38 600 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 KRT40Q6A162 431 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 UTS2BQ765I0 119 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 CXXC5Q7LFL8 322 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 STPG3Q8N7X2 389 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 FBXO36Q8NEA4 188 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 BEST2Q8NFU1 509 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 OR9G4Q8NGQ1 327 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 SLC44A1Q8WWI5 657 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 UBE2FQ969M7 185 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 PHF21AQ96BD5 680 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 HS3ST6Q96QI5 342 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 TMEM47Q9BQJ4 181 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 AMBRA1Q9C0C7 1298 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 C1orf198Q9H425 327 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 NARFLQ9H6Q4 476 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 POLE4Q9NR33 117 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 FBXL3Q9UKT7 428 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF346Q9UL40 294 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 MROH7-TTC4A0A0A0MT08 1334 aa5.85□□□□□ -1.47
TRAPPC11-209ENST00000512476 PDLIM1O00151 329 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZSCAN12O43309 604 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GATCO43716 136 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 NME2P1O60361 137 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 PSPNO60542 156 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GMDSO60547 372 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 FARP2O94887 1054 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MBPP02686 304 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 PLEKP08567 350 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 AMD1P17707 334 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GSTM2P28161 218 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GJB2P29033 226 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 LHX1P48742 406 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 PCYT1AP49585 367 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF75DP51815 510 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GHRHRQ02643 423 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CRYZQ08257 329 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CSRP2Q16527 193 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 TCTN3Q6NUS6 607 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAM151BQ6UXP7 276 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 Q6ZPB1 254 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 DPY19L4Q7Z388 723 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ALYREFQ86V81 257 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF34Q8IZ26 560 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CDK20Q8IZL9 346 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAR1Q8WVX9 515 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 OMA1Q96E52 524 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 SFXN2Q96NB2 322 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 TMEM175Q9BSA9 504 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MED10Q9BTT4 135 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 IL1RL2Q9HB29 575 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 C20orf96Q9NUD7 363 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CA5BQ9Y2D0 317 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MAP3K2Q9Y2U5 619 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CDHR2Q9BYE9 1310 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 OR6C68A6NDL8 312 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 M0R082 166 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 VCYO14598 125 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 LATO43561 262 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 OR4E1P0C645 316 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 UBTFL1P0CB47 393 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 UBCP0CG48 685 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 TSPAN8P19075 237 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CASP14P31944 242 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 AQP2P41181 271 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCT3P49368 545 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ATP1B3P54709 279 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 PRKCQQ04759 706 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MGAT3Q09327 533 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 HIST2H2ACQ16777 129 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 NKPD1Q17RQ9 610 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 SOWAHAQ2M3V2 549 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 KYAT3Q6YP21 454 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 TMPRSS11BQ86T26 416 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 MEX3DQ86XN8 651 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 CLVS1Q8IUQ0 354 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZBED8Q8IZ13 594 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF417Q8TAU3 575 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 DYDC1Q8WWB3 177 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 GGHQ92820 318 aa5.84□□□□□ -1.47
TRAPPC11-209ENST00000512476 PIGTQ969N2 578 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms