RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SP140LQ9H930 580 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 EMC3Q9P0I2 261 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 CKLFQ9UBR5 152 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 IGHV1OR21-1A0A087WYE8 117 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SPAARA0A1B0GVQ0 90 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 D6RAR5 112 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SDHDO14521 159 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 GFERP55789 205 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 CD47Q08722 323 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TRIM25Q14258 630 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 GRB7Q14451 532 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SLC23A3Q6PIS1 610 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 IZUMO2Q6UXV1 221 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 NDUFAF7Q7L592 441 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 DND1Q8IYX4 353 aaKnown RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 PRR22Q8IZ63 422 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 PROKR2Q8NFJ6 384 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 EFHD2Q96C19 240 aaPredicted RBP4.84□□□□□ -1.63
PHF3-210ENST00000509876 ZNF597Q96LX8 424 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TRAPPC9Q96Q05 1148 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 BTBD2Q9BX70 525 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 STMN3Q9NZ72 180 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 SATB2Q9UPW6 733 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 WDR37Q9Y2I8 494 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 DNAJC15Q9Y5T4 150 aa4.84□□□□□ -1.63
PHF3-210ENST00000509876 TTLL8A6PVC2 850 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 PATE3B3GLJ2 98 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 LRP3O75074 770 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 HMGN1P05114 100 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 FESP07332 822 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 UBL4AP11441 157 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 SLC6A6P31641 620 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 TRIM23P36406 574 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 MFSD13AQ14CX5 517 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 METTL25Q8N6Q8 603 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 DOK4Q8TEW6 326 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 OSBPL10Q9BXB5 764 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 PLEKHA1Q9HB21 404 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 ZNF160Q9HCG1 818 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 KCMF1Q9P0J7 381 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 PCDHGB2Q9Y5G2 931 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 M0QX08 132 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 SLC35E2P0CK97 266 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 ST6GAL1P15907 406 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 DIO3P55073 304 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 ZXDBP98169 803 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 CYBRD1Q53TN4 286 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 WDR74Q6RFH5 385 aaPredicted RBP4.84□□□□□ -1.64
PHF3-210ENST00000509876 TMPRSS12Q86WS5 348 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 L3MBTL4Q8NA19 623 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 UBXN10Q96LJ8 280 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 SLC46A1Q96NT5 459 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 FCRL4Q96PJ5 515 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 ACPTQ9BZG2 426 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 CDCP1Q9H5V8 836 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 UCK1Q9HA47 277 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 SLC23A2Q9UGH3 650 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 ERGIC3Q9Y282 383 aa4.84□□□□□ -1.64
PHF3-210ENST00000509876 GFYI3L273 518 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HRO43593 1189 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SMNDC1O75940 238 aaKnown RBP eCLIP4.83□□□□□ -1.64
PHF3-210ENST00000509876 CYB5AP00167 134 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 OPN1SWP03999 348 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 NPPBP16860 134 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ECHS1P30084 290 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 UBE2NP61088 152 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 PPP1R3AQ16821 1122 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 DCST2Q5T1A1 773 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GPR137CQ8N3F9 429 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GNPDA2Q8TDQ7 276 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CREB3L4Q8TEY5 395 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HSH2DQ96JZ2 352 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GPR83Q9NYM4 423 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SH3BGRL2Q9UJC5 107 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 POU2F3Q9UKI9 436 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ZNF451Q9Y4E5 1061 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 PCDHA9Q9Y5H5 950 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 NOBOXO60393 691 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 IGHV4-34P06331 123 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GP1BAP07359 652 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CKMT1AP12532 417 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ANXA8P13928 327 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HSD11B1P28845 292 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HTR6P50406 440 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 LIM2P55344 173 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CYP27C1Q4G0S4 372 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SMARCD3Q6STE5 483 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SBSNQ6UWP8 590 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 YTHDF3Q7Z739 585 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 RBM15BQ8NDT2 890 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 OR52N2Q8NGI0 321 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 FAR1Q8WVX9 515 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SLC30A3Q99726 388 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ACSS1Q9NUB1 689 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 DNAJB9Q9UBS3 223 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 RALGAPA2Q2PPJ7 1873 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms