RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZNF639Q9UID6 485 aa14.5□□□□□ -0.09
RAB40C-202ENST00000509637 FOXE1O00358 373 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 SNX4O95219 450 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 IL2RAP01589 272 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 RAF1P04049 648 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 FOSL1P15407 271 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 CTSSP25774 331 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 CRABP2P29373 138 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 MAGEA4P43358 317 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 XKP51811 444 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 LTBQ06643 244 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 C2orf54Q08AI8 447 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 PRICKLE4Q2TBC4 344 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 TBCELQ5QJ74 424 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 MROH9Q5TGP6 573 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 TBC1D1Q86TI0 1168 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 GALNT12Q8IXK2 581 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 TAGAPQ8N103 731 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 SPATA4Q8NEY3 305 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 RHEBL1Q8TAI7 183 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 ABTB1Q969K4 478 aaPredicted RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 MRRFQ96E11 262 aaKnown RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 PELOQ9BRX2 385 aaKnown RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 ITPAQ9BY32 194 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 MRPL1Q9BYD6 325 aaKnown RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 ANKRA2Q9H9E1 313 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 PRM3Q9NNZ6 103 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 SERHLQ9NQF3 203 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 FARSBQ9NSD9 589 aaKnown RBP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.49□□□□□ -0.09
RAB40C-202ENST00000509637 TXNDC16Q9P2K2 825 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 FETUBQ9UGM5 382 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 ACOT9Q9Y305 439 aa14.49□□□□□ -0.09
RAB40C-202ENST00000509637 FAM187AA6NFU0 413 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CLCA1A8K7I4 914 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 DYRK3O43781 588 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ICOSLGO75144 302 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 UGT2B11O75310 529 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CBX7O95931 251 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ALDOAP04075 364 aaKnown RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 KLK1P06870 262 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 GSTA2P09210 222 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CPMP14384 443 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CNTFP26441 200 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ALDH18A1P54886 795 aaKnown RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 PLTPP55058 493 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 TRAF3Q13114 568 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 LTB4RQ15722 352 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 OR52E8Q6IFG1 317 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CYP20A1Q6UW02 462 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ANGPTL8Q6UXH0 198 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CIARTQ8N365 385 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ADCY4Q8NFM4 1077 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CTHRC1Q96CG8 243 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 SECISBP2Q96T21 854 aaKnown RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 NOL11Q9H8H0 719 aaKnown RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 CALHM2Q9HA72 323 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 MAT2BQ9NZL9 334 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 EHD3Q9NZN3 535 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 MTRF1LQ9UGC7 380 aaKnown RBP14.48□□□□□ -0.09
RAB40C-202ENST00000509637 WIF1Q9Y5W5 379 aa14.48□□□□□ -0.09
RAB40C-202ENST00000509637 ABCA2Q9BZC7 2435 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 EEF1E1-BLOC1S5C9J1V9 151 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 TP53I11O14683 189 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 SNPHO15079 494 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 EEF1E1O43324 174 aaKnown RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 PPM1BO75688 479 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 IL18BPO95998 194 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 NT5EP21589 574 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 PIK3R1P27986 724 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 FEN1P39748 380 aaKnown RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 MASP1P48740 699 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 GALNT1Q10472 559 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 ILF2Q12905 390 aaKnown RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 TRMT12Q53H54 448 aaKnown RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 TECRLQ5HYJ1 363 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 CAMKMTQ7Z624 323 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 PACS2Q86VP3 889 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 NUDT13Q86X67 352 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 TRIM42Q8IWZ5 723 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 VWA5B2Q8N398 1253 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 C7orf57Q8NEG2 295 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 OR4K14Q8NGD5 310 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 RDH11Q8TC12 318 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 ZPLD1Q8TCW7 415 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 TM4SF18Q96CE8 201 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 ARSGQ96EG1 525 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 GALNT8Q9NY28 637 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 CPSF2Q9P2I0 782 aaKnown RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 FOXD3Q9UJU5 478 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-202ENST00000509637 ZNF225Q9UK10 706 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 MAPRE3Q9UPY8 281 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 ANGPTL3Q9Y5C1 460 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 PCDHA9Q9Y5H5 950 aa14.47□□□□□ -0.09
RAB40C-202ENST00000509637 UGDHO60701 494 aa14.46□□□□□ -0.09
RAB40C-202ENST00000509637 KLHL2O95198 593 aa14.46□□□□□ -0.09
RAB40C-202ENST00000509637 SBK3P0C264 359 aa14.46□□□□□ -0.09
RAB40C-202ENST00000509637 TMIGD3P0DMS9 266 aaPredicted RBP14.46□□□□□ -0.09
RAB40C-202ENST00000509637 GFAPP14136 432 aa14.46□□□□□ -0.09
RAB40C-202ENST00000509637 CPN1P15169 458 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms