RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 THAP4Q8WY91 577 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PTERQ96BW5 349 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RSPRY1Q96DX4 576 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 LRRC1Q9BTT6 524 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 SP140LQ9H930 580 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 RAB9BQ9NP90 201 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 DECR2Q9NUI1 292 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM74BQ9NUR3 256 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 MCUBQ9NWR8 336 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 FBXO5Q9UKT4 447 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TCAF1Q9Y4C2 921 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 GMPPBQ9Y5P6 360 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 PLXNA2O75051 1894 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 TTC3P53804 2025 aa2.81□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0G2JPF8 293 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OTOL1A6NHN0 477 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR52A4PA6NMU1 304 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ANXA2P2A6NMY6 339 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HNRNPCL3B7ZW38 293 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 E9PI62 339 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 H3BML4 177 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CDX4O14627 284 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BET1O15155 118 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TBX1O43435 398 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PEX11AO75192 247 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DNAJB5O75953 348 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 AP2A1O95782 977 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LDLRP01130 860 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 EIF4EP06730 217 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ITGA5P08648 1049 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HNRNPCL4P0DMR1 293 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NR2F6P10588 404 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CD247P20963 164 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FCARP24071 287 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PDHA2P29803 388 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR3A3P47888 321 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR3A2P47893 321 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CLRN1P58418 232 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPR18Q14330 331 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAM189A2Q15884 450 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SNAPC1Q16533 368 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FBXO48Q5FWF7 155 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 EXOSC6Q5RKV6 272 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PLEKHS1Q5SXH7 462 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SFRP5Q5T4F7 317 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 C3orf33Q6P1S2 294 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF549Q6P9A3 640 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LIPIQ6XZB0 460 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLCO6A1Q86UG4 719 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GPR137CQ8N3F9 429 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 DHRSXQ8N5I4 330 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF433Q8N7K0 673 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC24A4Q8NFF2 622 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SMPDL3AQ92484 453 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PSKH2Q96QS6 385 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR52E6Q96RD3 313 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CD180Q99467 661 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CHP1Q99653 195 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CSNK1G1Q9HCP0 422 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 HMG20AQ9NP66 347 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 BRD7Q9NPI1 651 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ARMC1Q9NVT9 282 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OCIAD1Q9NX40 245 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 MCTS1Q9ULC4 181 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ERGIC3Q9Y282 383 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TPRKBQ9Y3C4 175 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NUBP2Q9Y5Y2 271 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0G2JN53 185 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 NPIPB15A6NHN6 443 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM210A6NLX4 147 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PDCD5O14737 125 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TPP1O14773 563 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LRRTM2O43300 516 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ERI3O43414 337 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PLIN3O60664 434 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LCA5LO95447 670 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PNLIPP16233 465 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PECAM1P16284 738 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CSNK2A2P19784 350 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ACP1P24666 158 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 PSMB9P28065 219 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 FAUP35544 74 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GGT2P36268 569 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC15A1P46059 708 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 LEPRP48357 1165 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 CSNK1DP48730 415 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 RPS18P62269 152 aaKnown RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 INSM1Q01101 510 aaPredicted RBP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 ID2Q02363 134 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SCN1BQ07699 218 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 TBR1Q16650 682 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SPRED1Q7Z699 444 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 GRAMD2AQ8IUY3 354 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.8□□□□□ -1.96
NEDD4-208ENST00000508342 OR6K6Q8NGW6 343 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC13A3Q8WWT9 602 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SLC5A11Q8WWX8 675 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 SCAMP4Q969E2 229 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 WBP2Q969T9 261 aa2.8□□□□□ -1.96
NEDD4-208ENST00000508342 RAB39BQ96DA2 213 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms