RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 OR52R1Q8NGF1 315 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 GOT1L1Q8NHS2 421 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-210ENST00000506767 C16orf52Q8NHV5 167 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 NUBPLQ8TB37 319 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 AGAP4Q96P64 663 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 LMF1Q96S06 567 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 SLC25A23Q9BV35 468 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 ADNPQ9H2P0 1102 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 SAR1AQ9NR31 198 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 MRGBPQ9NV56 204 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 GPR83Q9NYM4 423 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 TAS2R9Q9NYW1 312 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 CCDC167Q9P0B6 97 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
TCOF1-210ENST00000506767 EIF4E1BA6NMX2 242 aaKnown RBP11.91□□□□□ -0.5
TCOF1-210ENST00000506767 A8MUI8 341 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 MKRN2OSH3BPM6 223 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 MAN1A2O60476 641 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 PRAMEF2O60811 474 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 FAM107AO95990 144 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-210ENST00000506767 GPC1P35052 558 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 MLF1P58340 268 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 LRRC74AQ0VAA2 488 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 RAPSNQ13702 412 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 AGKQ53H12 422 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ACER2Q5QJU3 275 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 TCTN3Q6NUS6 607 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ISLR2Q6UXK2 745 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 MSANTD1Q6ZTZ1 278 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 EXD3Q8N9H8 876 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 HOXB13Q92826 284 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 TP53INP1Q96A56 240 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 WBP1Q96G27 269 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ZNF354BQ96LW1 612 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 CCDC115Q96NT0 180 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 OR52E6Q96RD3 313 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 CCT8L2Q96SF2 557 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 ARHGAP9Q9BRR9 750 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 WWTR1Q9GZV5 400 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 CDCP1Q9H5V8 836 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 CXorf36Q9H7Y0 433 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 SERHLQ9NQF3 203 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 MYOTQ9UBF9 498 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 BCAP29Q9UHQ4 241 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 CFL2Q9Y281 166 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 DTX4Q9Y2E6 619 aa11.91□□□□□ -0.5
TCOF1-210ENST00000506767 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 DYTNA2CJ06 578 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 K7EM74 188 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 CDK2AP1O14519 115 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 EMC8O43402 210 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 PDGFAP04085 211 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 KCNK10P57789 538 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 KLF10Q13118 480 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 KCNAB2Q13303 367 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 MFAP5Q13361 173 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 TLR1Q15399 786 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 MEP1AQ16819 746 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 FCRLBQ6BAA4 426 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 SLC29A4Q7RTT9 530 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 ANKRD46Q86W74 232 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 THAP3Q8WTV1 239 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 TSPEARQ8WU66 669 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 SPDL1Q96EA4 605 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 FAM120BQ96EK7 910 aaKnown RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 GIMAP5Q96F15 307 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 VSTM2LQ96N03 204 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 BBC3Q96PG8 261 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 NMUR2Q9GZQ4 415 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 LIN28AQ9H9Z2 209 aaKnown RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 C3orf14Q9HBI5 128 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 DDX18Q9NVP1 670 aaKnown RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 STMN3Q9NZ72 180 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 PRODH2Q9UF12 536 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 TEKT2Q9UIF3 430 aa11.9□□□□□ -0.5
TCOF1-210ENST00000506767 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
TCOF1-210ENST00000506767 C2orf92A0A1B0GVN3 265 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ASPDHA6ND91 283 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CCDC154A6NI56 674 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 SLC22A2O15244 555 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CFLARO15519 480 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ZNF354AO60765 605 aaPredicted RBP11.89□□□□□ -0.51
TCOF1-210ENST00000506767 CCDC22O60826 627 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 COQ9O75208 318 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 ITGA10O75578 1167 aa11.89□□□□□ -0.51
TCOF1-210ENST00000506767 NADKO95544 446 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms