RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 NSUN5P2Q63ZY6 315 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 FRG2Q64ET8 278 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 TIGD3Q6B0B8 471 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 TTC19Q6DKK2 380 aaPredicted RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 PTGR2Q8N8N7 351 aaPredicted RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 HSPBAP1Q96EW2 488 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 WDYHV1Q96HA8 205 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 FRG2BQ96QU4 278 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 SECISBP2Q96T21 854 aaKnown RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 UGT2B28Q9BY64 529 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 NXF5Q9H1B4 397 aaKnown RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 MTRF1LQ9UGC7 380 aaKnown RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 DTX4Q9Y2E6 619 aa10.39□□□□□ -0.75
SIL1-208ENST00000505945 ZNF469Q96JG9 3925 aaPredicted RBP10.39□□□□□ -0.75
SIL1-208ENST00000505945 ESYT3A0FGR9 886 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 TUBAL3A6NHL2 446 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 CD8B2A6NJW9 211 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 PORP16435 677 aaPredicted RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 KRT15P19012 456 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 GPX3P22352 226 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 PTPN6P29350 595 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 FEN1P39748 380 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 SERPINB8P50452 374 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 RPP38P78345 283 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 SLC7A5Q01650 507 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 FOXD4Q12950 439 aaPredicted RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 EXOSC7Q15024 291 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 SF3B4Q15427 424 aaKnown RBP eCLIP10.38□□□□□ -0.754e-13■■■■■ 34
SIL1-208ENST00000505945 NHSL2Q5HYW2 709 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 C6orf163Q5TEZ5 329 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 FBXW10Q5XX13 1052 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 METTL2BQ6P1Q9 378 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 FAM111BQ6SJ93 734 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 ANGPTL8Q6UXH0 198 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 YRDCQ86U90 279 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 MMP21Q8N119 569 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 SIMC1Q8NDZ2 872 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 OR7G1Q8NGA0 311 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 OR1J4Q8NGS1 313 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 LINC01560Q8TB33 94 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 ABTB1Q969K4 478 aaPredicted RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 NTNG2Q96CW9 530 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 TMEM41AQ96HV5 264 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 NSUN5Q96P11 429 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 NTMT1Q9BV86 223 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 METTL7AQ9H8H3 244 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 ZBTB26Q9HCK0 441 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 AHSPQ9NZD4 102 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 BCAP29Q9UHQ4 241 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 FOXD3Q9UJU5 478 aaPredicted RBP10.38□□□□□ -0.75
SIL1-208ENST00000505945 ADAM29Q9UKF5 820 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
SIL1-208ENST00000505945 DOCK7Q96N67 2140 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 A0A1B0GTL3 188 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 EEF1E1-BLOC1S5C9J1V9 151 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 EEF1E1O43324 174 aaKnown RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 ICOSLGO75144 302 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 ERAL1O75616 437 aaKnown RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 PPM1BO75688 479 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 EPXP11678 715 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 NAGAP17050 411 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 CTSSP25774 331 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 CASQ1P31415 396 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 DEKP35659 375 aaKnown RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 SOX18P35713 384 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MAPK12P53778 367 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MGAT2Q10469 447 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MAP4K2Q12851 820 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 IFT88Q13099 833 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 TRAF3Q13114 568 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 PRICKLE4Q2TBC4 344 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 FAM180BQ6P0A1 224 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 SLC48A1Q6P1K1 146 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 RPS27LQ71UM5 84 aaKnown RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 PAGE2Q7Z2X7 111 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 NUP54Q7Z3B4 507 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 COMMD6Q7Z4G1 85 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MILR1Q7Z6M3 343 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 KIF18BQ86Y91 864 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 VWA5B2Q8N398 1253 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 METTL4Q8N3J2 472 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 C9orf106Q8NAJ2 232 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 FAM83FQ8NEG4 500 aaPredicted RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 C17orf47Q8NEP4 570 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 ADCY4Q8NFM4 1077 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 OR4F6Q8NGB9 312 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
SIL1-208ENST00000505945 TRPC4APQ8TEL6 797 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 NODALQ96S42 347 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 ITPAQ9BY32 194 aa10.37□□□□□ -0.75
SIL1-208ENST00000505945 BRINP2Q9C0B6 783 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms