RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CPTPQ5TA50 214 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NXNQ6DKJ4 435 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SLC2A7Q6PXP3 512 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NPSR1Q6W5P4 371 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TMEM64Q6YI46 380 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 C16orf47Q6ZP98 133 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GK5Q6ZS86 529 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MSANTD1Q6ZTZ1 278 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 R3HCC1LQ7Z5L2 792 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ANKRD46Q86W74 232 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GALNT12Q8IXK2 581 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 FAM9CQ8IZT9 166 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CLEC4FQ8N1N0 589 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TMEM102Q8N9M5 508 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OR8K3Q8NH51 312 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OR14A16Q8NHC5 309 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 C16orf52Q8NHV5 167 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 M1APQ8TC57 530 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MIPOL1Q8TD10 442 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZFP90Q8TF47 636 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OR5P2Q8WZ92 322 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 KAT2AQ92830 837 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RIT1Q92963 219 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NCLNQ969V3 563 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 KIAA1143Q96AT1 154 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ERP27Q96DN0 273 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RBM18Q96H35 190 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 IP6K3Q96PC2 410 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 LPAR4Q99677 370 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GPATCH1Q9BRR8 931 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 YIPF2Q9BWQ6 316 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TRIM45Q9H8W5 580 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 WDR41Q9HAD4 459 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZNF160Q9HCG1 818 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SH2D2AQ9NP31 389 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MIEF1Q9NQG6 463 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 FAM120CQ9NX05 1096 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TAS2R9Q9NYW1 312 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SH3BP4Q9P0V3 963 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GPN3Q9UHW5 284 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 BTNL2Q9UIR0 455 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 G3BP2Q9UN86 482 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MAPRE3Q9UPY8 281 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ERVK-19Q9WJR5 959 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GPR55Q9Y2T6 319 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ARL2BPQ9Y2Y0 163 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SPACA6W5XKT8 324 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CACNA1BQ00975 2339 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 A0A1W2PRB8 838 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CDC14CA4D256 554 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TO15178 435 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NKX2-2O95096 273 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ITGB2P05107 769 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 HMGN2P05204 90 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SERPINA7P05543 415 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ABCB1P08183 1280 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 PRKAR1AP10644 381 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 BMP2P12643 396 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CPOXP36551 454 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 HPCAL1P37235 193 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RPL3P39023 403 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 GZMMP51124 257 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NCBP2P52298 156 aaKnown RBP eCLIP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TMPRSS3P57727 454 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RNF4P78317 190 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 PLAURQ03405 335 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 STX4Q12846 297 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 HSPB3Q12988 150 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 EXOSC7Q15024 291 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ADRM1Q16186 407 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 COQ5Q5HYK3 327 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZNF468Q5VIY5 522 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SAXO2Q658L1 398 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 B3GNTL1Q67FW5 361 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 MFSD12Q6NUT3 480 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 TMEM107Q6UX40 140 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CCDC81Q6ZN84 652 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CPLX4Q7Z7G2 160 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RAB43Q86YS6 212 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SAMD14Q8IZD0 417 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 VWA5B2Q8N398 1253 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NATD1Q8N6N6 113 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SLC16A11Q8NCK7 471 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 C7orf57Q8NEG2 295 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 C17orf47Q8NEP4 570 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 FDCSPQ8NFU4 85 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 CDC26Q8NHZ8 85 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 NUBPLQ8TB37 319 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 FAM110BQ8TC76 370 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 BCAS4Q8TDM0 211 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 METTL21AQ8WXB1 218 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 DAZLQ92904 295 aaKnown RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 SPDL1Q96EA4 605 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 ZBED6CLQ96FA7 236 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 AURKBQ96GD4 344 aaPredicted RBP4.58□□□□□ -1.68
LMNB1-208ENST00000504788 RILPQ96NA2 401 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 BTBD9Q96Q07 612 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 OR52E6Q96RD3 313 aa4.58□□□□□ -1.68
LMNB1-208ENST00000504788 LMF1Q96S06 567 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms