RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 NEURL3Q96EH8 262 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 SENP5Q96HI0 755 aaPredicted RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 ART5Q96L15 291 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 CPPED1Q9BRF8 314 aaPredicted RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 IKZF5Q9H5V7 419 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 NANOGQ9H9S0 305 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 DKK4Q9UBT3 224 aa17.02■□□□□ 0.32
RGP1-202ENST00000496906 PPIEQ9UNP9 301 aaKnown RBP17.02■□□□□ 0.32
RGP1-202ENST00000496906 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 CLIC1O00299 241 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 SEC24DO94855 1032 aaPredicted RBP17.02■□□□□ 0.31
RGP1-202ENST00000496906 CLPSP04118 112 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 CHI3L1P36222 383 aaPredicted RBP17.02■□□□□ 0.31
RGP1-202ENST00000496906 RASSF2P50749 326 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 PSME3P61289 254 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 NCALDP61601 193 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 SRSF6Q13247 344 aaKnown RBP17.02■□□□□ 0.31
RGP1-202ENST00000496906 TP53BP2Q13625 1128 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 BHLHB9Q6PI77 547 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 GPR155Q7Z3F1 870 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 C6orf120Q7Z4R8 191 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 ZNF321PQ8N8H1 164 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 MORN4Q8NDC4 146 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 OR52R1Q8NGF1 315 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 OR8J3Q8NGG0 315 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 ZNF721Q8TF20 911 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 GIMAP5Q96F15 307 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 MS4A4EQ96PG1 132 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 TRIM8Q9BZR9 551 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 OR8D2Q9GZM6 311 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 ZNF700Q9H0M5 742 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.02■□□□□ 0.31
RGP1-202ENST00000496906 GPATCH2Q9NW75 528 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 WDR70Q9NW82 654 aa17.02■□□□□ 0.31
RGP1-202ENST00000496906 CEP295Q9C0D2 2601 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 C15orf38-AP3S2A0A0A6YYH1 394 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 COQ9O75208 318 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 BCAS2O75934 225 aaPredicted RBP17.01■□□□□ 0.31
RGP1-202ENST00000496906 KRT75O95678 551 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 GPR143P51810 404 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 PRKAG1P54619 331 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 MTPNP58546 118 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 SELPLGQ14242 412 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 RABL3Q5HYI8 236 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 ARPINQ7Z6K5 226 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 MRGPREQ86SM8 312 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 RAB43Q86YS6 212 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 DEFB107AQ8IZN7 70 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 ZNF615Q8N8J6 731 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 ZNF248Q8NDW4 579 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 B3GNT7Q8NFL0 401 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 OR7G1Q8NGA0 311 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 OR1N1Q8NGS0 311 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 PNPT1Q8TCS8 783 aaKnown RBP17.01■□□□□ 0.31
RGP1-202ENST00000496906 KCNE4Q8WWG9 221 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 GATA6Q92908 595 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 NAF1Q96HR8 494 aaKnown RBP17.01■□□□□ 0.31
RGP1-202ENST00000496906 OR10A5Q9H207 317 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 ANGPTL2Q9UKU9 493 aa17.01■□□□□ 0.31
RGP1-202ENST00000496906 PRAMEF2O60811 474 aa17■□□□□ 0.31
RGP1-202ENST00000496906 HMGN2P05204 90 aaKnown RBP17■□□□□ 0.31
RGP1-202ENST00000496906 PPIBP23284 216 aaKnown RBP17■□□□□ 0.31
RGP1-202ENST00000496906 MVDP53602 400 aa17■□□□□ 0.31
RGP1-202ENST00000496906 SLC37A1P57057 533 aa17■□□□□ 0.31
RGP1-202ENST00000496906 SLC26A5P58743 744 aa17■□□□□ 0.31
RGP1-202ENST00000496906 VAC14Q08AM6 782 aa17■□□□□ 0.31
RGP1-202ENST00000496906 ANGPTL8Q6UXH0 198 aa17■□□□□ 0.31
RGP1-202ENST00000496906 NDUFAF7Q7L592 441 aa17■□□□□ 0.31
RGP1-202ENST00000496906 RNF130Q86XS8 419 aa17■□□□□ 0.31
RGP1-202ENST00000496906 TMEM125Q96AQ2 219 aa17■□□□□ 0.31
RGP1-202ENST00000496906 IMMP1LQ96LU5 166 aa17■□□□□ 0.31
RGP1-202ENST00000496906 BTBD10Q9BSF8 475 aa17■□□□□ 0.31
RGP1-202ENST00000496906 NUDT9Q9BW91 350 aa17■□□□□ 0.31
RGP1-202ENST00000496906 ABCD2Q9UBJ2 740 aa17■□□□□ 0.31
RGP1-202ENST00000496906 BCAP29Q9UHQ4 241 aa17■□□□□ 0.31
RGP1-202ENST00000496906 CELSR3Q9NYQ7 3312 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 GYG2O15488 501 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 NME6O75414 186 aaPredicted RBP16.99■□□□□ 0.31
RGP1-202ENST00000496906 EMDP50402 254 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SLC7A2P52569 658 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 LASP1Q14847 261 aaKnown RBP16.99■□□□□ 0.31
RGP1-202ENST00000496906 MFSD12Q6NUT3 480 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SLC15A3Q8IY34 581 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 AMER2Q8N7J2 671 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 APCDD1LQ8NCL9 501 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 OR52N2Q8NGI0 321 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 NCLNQ969V3 563 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SLC35G5Q96KT7 338 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SH3GL1Q99961 368 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SEMA4CQ9C0C4 833 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 SERHL2Q9H4I8 314 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 CCDC86Q9H6F5 360 aaKnown RBP16.99■□□□□ 0.31
RGP1-202ENST00000496906 SPAG4Q9NPE6 437 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 EQTNQ9NQ60 294 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 CMTM6Q9NX76 183 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 P4HTMQ9NXG6 502 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 COPS7AQ9UBW8 275 aa16.99■□□□□ 0.31
RGP1-202ENST00000496906 NSG1A0A0A6YYJ2 146 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 ERICH4A6NGS2 130 aa16.98■□□□□ 0.31
RGP1-202ENST00000496906 EVPLLA8MZ36 301 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms