RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MID1IP1Q9NPA3 183 aa22.27■■□□□ 1.16
HLA-C-209ENST00000495835 EHD3Q9NZN3 535 aa22.27■■□□□ 1.16
HLA-C-209ENST00000495835 UTS2RQ9UKP6 389 aa22.27■■□□□ 1.16
HLA-C-209ENST00000495835 DLGAP4Q9Y2H0 992 aa22.27■■□□□ 1.16
HLA-C-209ENST00000495835 ATP6AP2A0A1C7CYW4 349 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 GNG14A0A1W2PPG7 69 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 ACOX3O15254 700 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 PCDH7O60245 1069 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 PLIN3O60664 434 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 TRIM3O75382 744 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-209ENST00000495835 ATP6AP2O75787 350 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 COX6B1P14854 86 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 RAE1P78406 368 aaKnown RBP22.26■■□□□ 1.15
HLA-C-209ENST00000495835 PRAMEF20Q5VT98 475 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 MCEMP1Q8IX19 187 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 CCNYL1Q8N7R7 359 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 SPPL2AQ8TCT8 520 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 CNRIP1Q96F85 164 aaPredicted RBP22.26■■□□□ 1.15
HLA-C-209ENST00000495835 METTL2AQ96IZ6 378 aaKnown RBP22.26■■□□□ 1.15
HLA-C-209ENST00000495835 ANGPTL4Q9BY76 406 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 OXSMQ9NWU1 459 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 PRODH2Q9UF12 536 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 MID2Q9UJV3 735 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 WBP11Q9Y2W2 641 aaKnown RBP22.26■■□□□ 1.15
HLA-C-209ENST00000495835 TIMM22Q9Y584 194 aa22.26■■□□□ 1.15
HLA-C-209ENST00000495835 TRGV5A0A0B4J1U4 118 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 COPEO14579 308 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 WDR1O75083 606 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 CHN1P15882 459 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 ACVR2AP27037 513 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 ABCD3P28288 659 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 CHRNB4P30926 498 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 TIA1P31483 386 aaKnown RBP eCLIP22.25■■□□□ 1.15
HLA-C-209ENST00000495835 ALDH9A1P49189 494 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 HTR6P50406 440 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 NAGLUP54802 743 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 PSPHP78330 225 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 CEBPEQ15744 281 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 FAM111BQ6SJ93 734 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 FRMD7Q6ZUT3 714 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 NCCRP1Q6ZVX7 275 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-209ENST00000495835 MARVELD2Q8N4S9 558 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 FAM76AQ8TAV0 307 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 APIPQ96GX9 242 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 LCORQ96JN0 433 aaPredicted RBP22.25■■□□□ 1.15
HLA-C-209ENST00000495835 ZNF597Q96LX8 424 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 SPOCK3Q9BQ16 436 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 HEY2Q9UBP5 337 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 BCAP29Q9UHQ4 241 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 LIPGQ9Y5X9 500 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 EXPH5Q8NEV8 1989 aa22.25■■□□□ 1.15
HLA-C-209ENST00000495835 LRRC3CA6NJW4 275 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 UBFD1O14562 309 aaKnown RBP22.24■■□□□ 1.15
HLA-C-209ENST00000495835 IL3P08700 152 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 CPA3P15088 417 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 DRD5P21918 477 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 PPICP45877 212 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 SLCO1A2P46721 670 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 FBXW4P57775 412 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 HMGCS1Q01581 520 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 SLC18A2Q05940 514 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 CDSNQ15517 529 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 CFAP157Q5JU67 520 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 WLSQ5T9L3 541 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 NUP54Q7Z3B4 507 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 TRIM46Q7Z4K8 759 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 PACS2Q86VP3 889 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 MMP21Q8N119 569 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 LILRB4Q8NHJ6 448 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 C16orf78Q8WTQ4 265 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 NTNG2Q96CW9 530 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 NXF5Q9H1B4 397 aaKnown RBP22.24■■□□□ 1.15
HLA-C-209ENST00000495835 PNPLA3Q9NST1 481 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 GIMAP4Q9NUV9 329 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 ACAD8Q9UKU7 415 aa22.24■■□□□ 1.15
HLA-C-209ENST00000495835 PKDREJQ9NTG1 2253 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 DCHS2Q6V1P9 2916 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 PPM1BO75688 479 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 CBX7O95931 251 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 CELA3AP09093 270 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 RFPL3SP0C7P2 107 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 GABRA1P14867 456 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 KRT4P19013 534 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 SOX18P35713 384 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 CASP3P42574 277 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 GDF7Q7Z4P5 450 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 RIBC1Q8N443 379 aaPredicted RBP22.23■■□□□ 1.15
HLA-C-209ENST00000495835 ACBD4Q8NC06 268 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 OR5M3Q8NGP4 307 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 KCNA7Q96RP8 456 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 ENKD1Q9H0I2 346 aa22.23■■□□□ 1.15
HLA-C-209ENST00000495835 FAM47E-STBD1D6RA91 191 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 TO15178 435 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 ABCB1P08183 1280 aaPredicted RBP22.22■■□□□ 1.15
HLA-C-209ENST00000495835 ANXA4P09525 319 aaPredicted RBP22.22■■□□□ 1.15
HLA-C-209ENST00000495835 PRF1P14222 555 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 MPIP34949 423 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 SNTA1Q13424 505 aa22.22■■□□□ 1.15
HLA-C-209ENST00000495835 TRMT12Q53H54 448 aaKnown RBP22.22■■□□□ 1.15
HLA-C-209ENST00000495835 LIPMQ5VYY2 423 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms