RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CXorf21Q9HAI6 301 aa8.8□□□□□ -1
UBR4-216ENST00000494503 GALNT9Q9HCQ5 603 aa8.8□□□□□ -1
UBR4-216ENST00000494503 SERHLQ9NQF3 203 aa8.8□□□□□ -1
UBR4-216ENST00000494503 EIF3LQ9Y262 564 aaKnown RBP8.8□□□□□ -1
UBR4-216ENST00000494503 ACOT9Q9Y305 439 aa8.8□□□□□ -1
UBR4-216ENST00000494503 RNF11Q9Y3C5 154 aa8.8□□□□□ -1
UBR4-216ENST00000494503 ASB4Q9Y574 426 aa8.8□□□□□ -1
UBR4-216ENST00000494503 JMJD1CQ15652 2540 aa8.8□□□□□ -1
UBR4-216ENST00000494503 A0A087X1B8 175 aa8.79□□□□□ -1
UBR4-216ENST00000494503 SH3D21A4FU49 640 aa8.79□□□□□ -1
UBR4-216ENST00000494503 ANKRD33BA6NCL7 494 aa8.79□□□□□ -1
UBR4-216ENST00000494503 GOLGA6L10A6NI86 522 aa8.79□□□□□ -1
UBR4-216ENST00000494503 PGRMC2O15173 223 aa8.79□□□□□ -1
UBR4-216ENST00000494503 TP73O15350 636 aa8.79□□□□□ -1
UBR4-216ENST00000494503 SMNDC1O75940 238 aaKnown RBP eCLIP8.79□□□□□ -1
UBR4-216ENST00000494503 SIX3O95343 332 aaPredicted RBP8.79□□□□□ -1
UBR4-216ENST00000494503 KLK1P06870 262 aa8.79□□□□□ -1
UBR4-216ENST00000494503 FOSL1P15407 271 aa8.79□□□□□ -1
UBR4-216ENST00000494503 CNTFP26441 200 aa8.79□□□□□ -1
UBR4-216ENST00000494503 BSGP35613 385 aa8.79□□□□□ -1
UBR4-216ENST00000494503 FEN1P39748 380 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 CCNG1P51959 295 aa8.79□□□□□ -1
UBR4-216ENST00000494503 NAGLUP54802 743 aa8.79□□□□□ -1
UBR4-216ENST00000494503 ALDH18A1P54886 795 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 PLTPP55058 493 aa8.79□□□□□ -1
UBR4-216ENST00000494503 NKX6-1P78426 367 aaPredicted RBP8.79□□□□□ -1
UBR4-216ENST00000494503 C2orf54Q08AI8 447 aa8.79□□□□□ -1
UBR4-216ENST00000494503 IFT88Q13099 833 aa8.79□□□□□ -1
UBR4-216ENST00000494503 EXOSC7Q15024 291 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 DAZAP2Q15038 168 aaPredicted RBP8.79□□□□□ -1
UBR4-216ENST00000494503 FBXL19-AS1Q494R0 122 aa8.79□□□□□ -1
UBR4-216ENST00000494503 CCNYL2Q5T2Q4 361 aa8.79□□□□□ -1
UBR4-216ENST00000494503 ENPP6Q6UWR7 440 aa8.79□□□□□ -1
UBR4-216ENST00000494503 P4HA3Q7Z4N8 544 aa8.79□□□□□ -1
UBR4-216ENST00000494503 IFNEQ86WN2 208 aa8.79□□□□□ -1
UBR4-216ENST00000494503 GRAMD2AQ8IUY3 354 aa8.79□□□□□ -1
UBR4-216ENST00000494503 TP53INP1Q96A56 240 aa8.79□□□□□ -1
UBR4-216ENST00000494503 MBD6Q96DN6 1003 aa8.79□□□□□ -1
UBR4-216ENST00000494503 WDYHV1Q96HA8 205 aa8.79□□□□□ -1
UBR4-216ENST00000494503 SERPINI1Q99574 410 aa8.79□□□□□ -1
UBR4-216ENST00000494503 ANGPTL4Q9BY76 406 aa8.79□□□□□ -1
UBR4-216ENST00000494503 NXF5Q9H1B4 397 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 VPS11Q9H270 941 aa8.79□□□□□ -1
UBR4-216ENST00000494503 NOL11Q9H8H0 719 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 DDX31Q9H8H2 851 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 GALNT8Q9NY28 637 aa8.79□□□□□ -1
UBR4-216ENST00000494503 WHRNQ9P202 907 aa8.79□□□□□ -1
UBR4-216ENST00000494503 DKKL1Q9UK85 242 aa8.79□□□□□ -1
UBR4-216ENST00000494503 UTP11Q9Y3A2 253 aaKnown RBP8.79□□□□□ -1
UBR4-216ENST00000494503 TLN2Q9Y4G6 2542 aa8.79□□□□□ -1
UBR4-216ENST00000494503 MBD3L4A6NDZ8 208 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 MBD3L3A6NE82 208 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 MBD3L5A6NJ08 208 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 CD8B2A6NJW9 211 aa8.78□□□□□ -1
UBR4-216ENST00000494503 H0YIV9 168 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SMAD7O15105 426 aaKnown RBP8.78□□□□□ -1
UBR4-216ENST00000494503 EIF3HO15372 352 aaKnown RBP eCLIP8.78□□□□□ -17e-15■■□□□ 13
UBR4-216ENST00000494503 CDH16O75309 829 aa8.78□□□□□ -1
UBR4-216ENST00000494503 PPM1BO75688 479 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CLDN9O95484 217 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ESRRBO95718 433 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ACTL6AO96019 429 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CLPSP04118 112 aa8.78□□□□□ -1
UBR4-216ENST00000494503 GSTA2P09210 222 aa8.78□□□□□ -1
UBR4-216ENST00000494503 INHBBP09529 407 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CPMP14384 443 aa8.78□□□□□ -1
UBR4-216ENST00000494503 PORP16435 677 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 GPX3P22352 226 aa8.78□□□□□ -1
UBR4-216ENST00000494503 PTPN6P29350 595 aa8.78□□□□□ -1
UBR4-216ENST00000494503 MAPK12P53778 367 aa8.78□□□□□ -1
UBR4-216ENST00000494503 DIO3P55073 304 aa8.78□□□□□ -1
UBR4-216ENST00000494503 GPX6P59796 221 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SORDQ00796 357 aa8.78□□□□□ -1
UBR4-216ENST00000494503 FOXF2Q12947 444 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CUL3Q13618 768 aa8.78□□□□□ -1
UBR4-216ENST00000494503 TIGD3Q6B0B8 471 aa8.78□□□□□ -1
UBR4-216ENST00000494503 DESI1Q6ICB0 168 aa8.78□□□□□ -1
UBR4-216ENST00000494503 MRM1Q6IN84 353 aaKnown RBP8.78□□□□□ -1
UBR4-216ENST00000494503 PPP4R4Q6NUP7 873 aa8.78□□□□□ -1
UBR4-216ENST00000494503 FAM180BQ6P0A1 224 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CHMP1BQ7LBR1 199 aa8.78□□□□□ -1
UBR4-216ENST00000494503 PAGE2Q7Z2X7 111 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ZNF441Q8N8Z8 693 aa8.78□□□□□ -1
UBR4-216ENST00000494503 CNEP1R1Q8N9A8 125 aa8.78□□□□□ -1
UBR4-216ENST00000494503 LRRN4CLQ8ND94 238 aa8.78□□□□□ -1
UBR4-216ENST00000494503 MBD3L2Q8NHZ7 208 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 SLC44A1Q8WWI5 657 aa8.78□□□□□ -1
UBR4-216ENST00000494503 KLHL29Q96CT2 875 aa8.78□□□□□ -1
UBR4-216ENST00000494503 OMA1Q96E52 524 aa8.78□□□□□ -1
UBR4-216ENST00000494503 PHF21BQ96EK2 531 aa8.78□□□□□ -1
UBR4-216ENST00000494503 TMEM41AQ96HV5 264 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SFXN2Q96NB2 322 aa8.78□□□□□ -1
UBR4-216ENST00000494503 FAM111AQ96PZ2 611 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SECISBP2Q96T21 854 aaKnown RBP8.78□□□□□ -1
UBR4-216ENST00000494503 TM9SF2Q99805 663 aa8.78□□□□□ -1
UBR4-216ENST00000494503 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ERP44Q9BS26 406 aa8.78□□□□□ -1
UBR4-216ENST00000494503 SFXN3Q9BWM7 321 aa8.78□□□□□ -1
UBR4-216ENST00000494503 ZNF717Q9BY31 904 aaPredicted RBP8.78□□□□□ -1
UBR4-216ENST00000494503 ITPAQ9BY32 194 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms