RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CTAGE4Q8IX94 777 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 ZNF595Q8IYB9 648 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 LAS2Q8IYD9 372 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 TEX9Q8N6V9 391 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 HORMAD2Q8N7B1 307 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 FAM47BQ8NA70 645 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 TMEM178AQ8NBL3 297 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 NOA1Q8NC60 698 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 APCDD1LQ8NCL9 501 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MDS2Q8NDY4 140 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 SRFBP1Q8NEF9 429 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 MNS1Q8NEH6 495 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 B3GNT7Q8NFL0 401 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 OR7G3Q8NG95 312 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 ZNF473Q8WTR7 871 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 SLC7A6OSQ96CW6 309 aaPredicted RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 BDH2Q9BUT1 245 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 ROGDIQ9GZN7 287 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 QRSL1Q9H0R6 528 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 TSPYL1Q9H0U9 437 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 VPS11Q9H270 941 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 OR51B5Q9H339 312 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CDC42EP4Q9H3Q1 356 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 SEC14L3Q9UDX4 400 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 FBXW2Q9UKT8 454 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 DAPP1Q9UN19 280 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 MRPS33Q9Y291 106 aaKnown RBP7.52□□□□□ -1.21
RIF1-211ENST00000494333 PCDHGB6Q9Y5F9 930 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 CLDN16Q9Y5I7 305 aa7.52□□□□□ -1.21
RIF1-211ENST00000494333 NUP210LQ5VU65 1888 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 TRBV11-1A0A0K0K1C0 115 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 A0A1B0GUH1 482 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 LRRC14BA6NHZ5 514 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 POC1B-GALNT4F8VUJ3 575 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 SAP18O00422 153 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 CTNSO60931 367 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 NEURL1O76050 574 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ALDOAP04075 364 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 IFNA16P05015 189 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 SP1P08047 785 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 INHBAP08476 426 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 TNNI3P19429 210 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ATP5A1P25705 553 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 PPP2R1BP30154 601 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 GPR143P51810 404 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ALDH18A1P54886 795 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 PER3P56645 1201 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 STX4Q12846 297 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 DDX39BQ13838 428 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 E2F2Q14209 437 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 AP5B1Q2VPB7 878 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 TMEM35AQ53FP2 167 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 GLE1Q53GS7 698 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 TOR2AQ5JU69 321 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 DEPDC1Q5TB30 811 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 C1QL3Q5VWW1 255 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ZNF793Q6ZN11 406 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 RNF175Q8N4F7 328 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ACOT4Q8N9L9 421 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 HUS1BQ8NHY5 278 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ADAMTS18Q8TE60 1221 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 UBTD2Q8WUN7 234 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 NCLNQ969V3 563 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 TMEM125Q96AQ2 219 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 CMTM7Q96FZ5 175 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 SCMH1Q96GD3 660 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 RAX2Q96IS3 184 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 GPR78Q96P69 363 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 GNRHR2Q96P88 292 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 CSF3RQ99062 836 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 FMO2Q99518 471 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 MTERF1Q99551 399 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 MAPKAP1Q9BPZ7 522 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 TBCDQ9BTW9 1192 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 SSBP3Q9BWW4 388 aaPredicted RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 MS4A8Q9BY19 250 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 ALOXE3Q9BYJ1 711 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 C12orf65Q9H3J6 166 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 ACTR8Q9H981 624 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 CCM2LQ9NUG4 571 aaPredicted RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 CPSF2Q9P2I0 782 aaKnown RBP7.51□□□□□ -1.21
RIF1-211ENST00000494333 OAZ3Q9UMX2 235 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 IKBKGQ9Y6K9 419 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 CLCA3PQ9Y6N3 262 aa7.51□□□□□ -1.21
RIF1-211ENST00000494333 COL12A1Q99715 3063 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SPENQ96T58 3664 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 TRGV8A0A0C4DH27 118 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 CCDC189A1A4V9 331 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ASPDHA6ND91 283 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 FCHO1O14526 889 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 KLK8O60259 260 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ZG16O60844 167 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 LDB3O75112 727 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ITGA10O75578 1167 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SLC25A12O75746 678 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ZFAND5O76080 213 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SIX3O95343 332 aaPredicted RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 LY86O95711 162 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 TUBB4AP04350 444 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms