RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 K7EPI3 171 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 MSTNO14793 375 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 SNPHO15079 494 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 ABCB1P08183 1280 aaPredicted RBP16.06■□□□□ 0.16
NUP50-218ENST00000493456 NAGAP17050 411 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 PHEXP78562 749 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 SNTA1Q13424 505 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 C6orf163Q5TEZ5 329 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 OR52E8Q6IFG1 317 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 CYP20A1Q6UW02 462 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 GCNT2Q8N0V5 402 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 ZNF615Q8N8J6 731 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 FBXO36Q8NEA4 188 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 OR7G1Q8NGA0 311 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 UBTD2Q8WUN7 234 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 NANOS1Q8WY41 292 aaKnown RBP16.06■□□□□ 0.16
NUP50-218ENST00000493456 EXT2Q93063 718 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 OSBPL9Q96SU4 736 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 OSBPL11Q9BXB4 747 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 ZNF717Q9BY31 904 aaPredicted RBP16.06■□□□□ 0.16
NUP50-218ENST00000493456 OR2B2Q9GZK3 357 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 ACTR8Q9H981 624 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 CAB39LQ9H9S4 337 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 OPTCQ9UBM4 332 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 TRPS1Q9UHF7 1281 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 PPP2R2CQ9Y2T4 447 aa16.06■□□□□ 0.16
NUP50-218ENST00000493456 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 PHGDHO43175 533 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 SIAH2O43255 324 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 TMPRSS11DO60235 418 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 EEDO75530 441 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 PPM1BO75688 479 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 CBR3O75828 277 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 TNFSF13O75888 250 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 AIFM1O95831 613 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 FAM58BPP0C7Q3 252 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 STMN1P16949 149 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 CRYGSP22914 178 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 PTX3P26022 381 aaPredicted RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 SRYQ05066 204 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 KBTBD12Q3ZCT8 623 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 IFNEQ86WN2 208 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 GRAMD2AQ8IUY3 354 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 PRR22Q8IZ63 422 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 RNF175Q8N4F7 328 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 OR14L1PQ8NHC6 308 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 DTNBP1Q96EV8 351 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 UBXN10Q96LJ8 280 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 MTERF1Q99551 399 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 MED18Q9BUE0 208 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 G6PC3Q9BUM1 346 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 GSX2Q9BZM3 304 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 DDX31Q9H8H2 851 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 ADAM21Q9UKJ8 722 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 EXO1Q9UQ84 846 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 MTO1Q9Y2Z2 717 aaKnown RBP16.05■□□□□ 0.16
NUP50-218ENST00000493456 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
NUP50-218ENST00000493456 A0A1W2PNV4 684 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 WASHC1A8K0Z3 465 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 CRHP06850 196 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 EPB42P16452 691 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 PIK3R1P27986 724 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 BSGP35613 385 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 GFRA1P56159 465 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 CUL3Q13618 768 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 ZKSCAN8Q15776 578 aaPredicted RBP16.04■□□□□ 0.16
NUP50-218ENST00000493456 AAGABQ6PD74 315 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 NUP54Q7Z3B4 507 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 NUDT13Q86X67 352 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 TRIM42Q8IWZ5 723 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 STAG3L4Q8TBR4 150 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 CTHRC1Q96CG8 243 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 REPS1Q96D71 796 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 PIK3IP1Q96FE7 263 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 WFIKKN1Q96NZ8 548 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 GPR22Q99680 433 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 KLRF1Q9NZS2 232 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 TXNDC16Q9P2K2 825 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 CFL2Q9Y281 166 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 CUBNO60494 3623 aa16.04■□□□□ 0.16
NUP50-218ENST00000493456 RTTNQ86VV8 2226 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 E7ESA3 106 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 PLOD2O00469 737 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 ICOSLGO75144 302 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 CNOT4O95628 575 aaKnown RBP16.03■□□□□ 0.16
NUP50-218ENST00000493456 CT62P0C5K7 136 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 GPX3P22352 226 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 LHX2P50458 406 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 RAB10P61026 200 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 FAM27E3Q08E93 113 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 PDIA2Q13087 525 aaKnown RBP16.03■□□□□ 0.16
NUP50-218ENST00000493456 FASTKD3Q14CZ7 662 aaKnown RBP16.03■□□□□ 0.16
NUP50-218ENST00000493456 LIPJQ5W064 366 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 MYLK4Q86YV6 388 aaPredicted RBP16.03■□□□□ 0.16
NUP50-218ENST00000493456 CDKL2Q92772 493 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 HGDQ93099 445 aa16.03■□□□□ 0.16
NUP50-218ENST00000493456 NXF5Q9H1B4 397 aaKnown RBP16.03■□□□□ 0.16
NUP50-218ENST00000493456 ALG9Q9H6U8 611 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms