RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FBXW4P57775 412 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 KRTAP10-9P60411 292 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 CLCQ05315 142 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 CSTF3Q12996 717 aaKnown RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 NHSL2Q5HYW2 709 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 TEX35Q5T0J7 233 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 SLC30A6Q6NXT4 461 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ARSKQ6UWY0 536 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 SPNS3Q6ZMD2 512 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 TRMT10CQ7L0Y3 403 aaKnown RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 LACC1Q8IV20 430 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 SLC22A9Q8IVM8 553 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 GBP7Q8N8V2 638 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 OR1J4Q8NGS1 313 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 DOK4Q8TEW6 326 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 DCAKDQ8WVC6 231 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF592Q92610 1267 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 UCN3Q969E3 161 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 TM4SF18Q96CE8 201 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 ERP27Q96DN0 273 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 LCORQ96JN0 433 aaPredicted RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 RILPQ96NA2 401 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 NSUN5Q96P11 429 aaKnown RBP11.42□□□□□ -0.58
COL6A1-205ENST00000492851 TIMP4Q99727 224 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 BRINP2Q9C0B6 783 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 FETUBQ9UGM5 382 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 BCAP29Q9UHQ4 241 aa11.42□□□□□ -0.58
COL6A1-205ENST00000492851 TACC2O95359 2948 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 A8MT66 165 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ABCB7O75027 752 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ERAL1O75616 437 aaKnown RBP11.41□□□□□ -0.58
COL6A1-205ENST00000492851 PPM1BO75688 479 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 SUPT7LO94864 414 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ACTL6AO96019 429 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ABCB1P08183 1280 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ABHD2P08910 425 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 CT62P0C5K7 136 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 RHOXF2BP0C7M4 288 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 CD1EP15812 388 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 IMPDH1P20839 514 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ENDOUP21128 410 aaKnown RBP11.41□□□□□ -0.58
COL6A1-205ENST00000492851 S1PR1P21453 382 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 GPX3P22352 226 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ADH7P40394 386 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 PPICP45877 212 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 GSTM5P46439 218 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 CDH13P55290 713 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 NAA20P61599 178 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 GALNT1Q10472 559 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-205ENST00000492851 HEPACAMQ14CZ8 416 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 TOMM20Q15388 145 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 PRICKLE4Q2TBC4 344 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 TIGD3Q6B0B8 471 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 VASNQ6EMK4 673 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 SCIMPQ6UWF3 145 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 WDR53Q7Z5U6 358 aaPredicted RBP11.41□□□□□ -0.58
COL6A1-205ENST00000492851 TMEM200AQ86VY9 491 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 TMEM151AQ8N4L1 468 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ACMSDQ8TDX5 336 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 KLHL29Q96CT2 875 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 TMCO6Q96DC7 493 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 GNRHR2Q96P88 292 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 PRDM14Q9GZV8 571 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 SLC6A15Q9H2J7 730 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 UBQLN3Q9H347 655 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF639Q9UID6 485 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 MCM8Q9UJA3 840 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 C15orf41Q9Y2V0 281 aa11.41□□□□□ -0.58
COL6A1-205ENST00000492851 DCHS2Q6V1P9 2916 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CD8B2A6NJW9 211 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 H3BQF6 201 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CBR3O75828 277 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 ESRRBO95718 433 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 GSTA1P08263 222 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 ATP5F1P24539 256 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CEACAM8P31997 349 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 FEN1P39748 380 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 KIR2DL3P43628 341 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 TRPC1P48995 793 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 RIPPLY3P57055 190 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 EEF1A1P68104 462 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CRYZQ08257 329 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 MGAT2Q10469 447 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 TESK1Q15569 626 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 SPIN4Q56A73 249 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF678Q5SXM1 525 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 EEF1A1P5Q5VTE0 462 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 LETMD1Q6P1Q0 360 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 TMEM64Q6YI46 380 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 LIX1LQ8IVB5 337 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CEP112Q8N8E3 955 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 NOA1Q8NC60 698 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 METTL6Q8TCB7 284 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CTHRC1Q96CG8 243 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CCDC126Q96EE4 140 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF382Q96SR6 550 aa11.4□□□□□ -0.58
COL6A1-205ENST00000492851 NXF5Q9H1B4 397 aaKnown RBP11.4□□□□□ -0.58
COL6A1-205ENST00000492851 CALHM2Q9HA72 323 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms