RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 GABARAPL3Q9BY60 117 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CHST8Q9H2A9 424 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ATAD3AQ9NVI7 634 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 BTNL2Q9UIR0 455 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 AP1M2Q9Y6Q5 423 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 E9PQ18 207 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 HCRTR1O43613 425 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 DUX1O43812 170 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CTSVO60911 334 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 HSD3B1P14060 373 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 HSD3B2P26439 372 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ASMTP46597 345 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CCR8P51685 355 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 KCNJ10P78508 379 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 FADDQ13158 208 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 SLC5A12Q1EHB4 618 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 CPTPQ5TA50 214 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ARMC6Q6NXE6 501 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ENTHD1Q8IYW4 607 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 VPS37AQ8NEZ2 397 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 APH1BQ8WW43 257 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 UBE2FQ969M7 185 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 C11orf24Q96F05 449 aaPredicted RBP21.46■■□□□ 1.03
USF3-203ENST00000491165 SIGLEC11Q96RL6 698 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ALOXE3Q9BYJ1 711 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 GIN1Q9NXP7 522 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 FTSJ1Q9UET6 329 aa21.46■■□□□ 1.03
USF3-203ENST00000491165 ADAMTS20P59510 1910 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 IGHV5-51A0A0C4DH38 117 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 A0A0J9YY10 115 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 CLDN24A6NM45 220 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 RPLP0P05388 317 aaKnown RBP21.45■■□□□ 1.02
USF3-203ENST00000491165 NUDT7P0C024 238 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 CD36P16671 472 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 ABATP80404 500 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 COL9A2Q14055 689 aaPredicted RBP21.45■■□□□ 1.02
USF3-203ENST00000491165 OR7G3Q8NG95 312 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 LGALS12Q96DT0 336 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 HRASLS5Q96KN8 279 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 RAB33BQ9H082 229 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 RUBCNLQ9H714 662 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 PELI2Q9HAT8 420 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 FAM60AQ9NP50 221 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 EPHA6Q9UF33 1036 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 MAPRE3Q9UPY8 281 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 PCDHGB3Q9Y5G1 929 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 SPTBP11277 2137 aa21.45■■□□□ 1.02
USF3-203ENST00000491165 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.44■■□□□ 1.02
USF3-203ENST00000491165 C1orf226A1L170 272 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 H0YIV9 168 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 ALOX5P09917 674 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 ACP1P24666 158 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 TGFBR2P37173 567 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 HNF4AP41235 474 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 INAVAQ3KP66 663 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 UBE2UQ5VVX9 321 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 VN1R5Q7Z5H4 357 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 PAQR7Q86WK9 346 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 BTBD2Q9BX70 525 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 BRF2Q9HAW0 419 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 PADI2Q9Y2J8 665 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 GABRR3A8MPY1 467 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 TNFSF14O43557 240 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 TBX6O95947 436 aaPredicted RBP21.44■■□□□ 1.02
USF3-203ENST00000491165 LCKP06239 509 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 PCGF2P35227 344 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 CRYBA2P53672 197 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 REEP5Q00765 189 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 IFITM3Q01628 133 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 ANXA8L1Q5VT79 327 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 FIGLAQ6QHK4 219 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 P3H2Q8IVL5 708 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 FCGR1BQ92637 280 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 EFCAB11Q9BUY7 163 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 LRRN3Q9H3W5 708 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 TMEM184CQ9NVA4 438 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 PCDHGA6Q9Y5G7 932 aa21.44■■□□□ 1.02
USF3-203ENST00000491165 SLC9B1P1A6NJY1 282 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 STATHP02808 62 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 ANXA4P09525 319 aaPredicted RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 RRM2P31350 389 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 BCL6P41182 706 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 RAE1P78406 368 aaKnown RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 RGNQ15493 299 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 SNAP47Q5SQN1 464 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 FBXO42Q6P3S6 717 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 TMIGD1Q6UXZ0 262 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 CAMKMTQ7Z624 323 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 LAS2Q8IYD9 372 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 C1orf52Q8N6N3 182 aaKnown RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 RPL3LQ92901 407 aaKnown RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 DOHHQ9BU89 302 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 ITPAQ9BY32 194 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 SLIRPQ9GZT3 109 aaKnown RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 OSGIN1Q9UJX0 560 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 KLK4Q9Y5K2 254 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 MN1Q10571 1320 aaPredicted RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 PTPRZ1P23471 2315 aaPredicted RBP21.43■■□□□ 1.02
USF3-203ENST00000491165 EFCAB9A8MZ26 197 aa21.43■■□□□ 1.02
USF3-203ENST00000491165 AQP1P29972 269 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms